File Specifications for Downloading Manual Annotations for Protein2GO

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Revision as of 15:34, 22 January 2013 by Vanaukenk (talk | contribs)
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Background: WormBase will be sending files of its manual GO annotations to be incorporated into Protein2GO.

Details of the migration plan are available on the GO wiki:

Summary of Requirements:

  1. Separate GAF for each curator
  2. Remove IEP annotations for gene or transcript

Details of Requirements:

  • Separate GAF for each curator
    • Carol Bastiani
    • Josh Jaffery
    • Ranjana Kishore
    • Kimberly Van Auken
  • Each GAF should be named according to the following convention:
    • The file name should be in the format: ‘gene_association.mod.Firstname_Lastname’, e.g. gene_association.wb.Joe_Bloggs