Difference between revisions of "Example Pages"

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Line 20: Line 20:
 
<td><nowiki>http://dev.wormbase.org:8023/species/c_elegans/antibody/[cgc2813]:emb-9</nowiki></td>
 
<td><nowiki>http://dev.wormbase.org:8023/species/c_elegans/antibody/[cgc2813]:emb-9</nowiki></td>
 
<td><nowiki>http://dev.wormbase.org:8023/species/c_elegans/antibody/[cgc3186]:pgl-1</nowiki></td>
 
<td><nowiki>http://dev.wormbase.org:8023/species/c_elegans/antibody/[cgc3186]:pgl-1</nowiki></td>
 +
</tr>
 +
 +
<tr>
 +
<td>CDS*</td>
 +
<td></td>
 +
<td>[http://dev.wormbase.org:8023/species/c_elegans/cds/JC8.10c JC8.10c]</td>
 
</tr>
 
</tr>
  
Line 25: Line 31:
 
<td>Clone</td>
 
<td>Clone</td>
 
<td>[http://dev.wormbase.org:8023/species/c_elegans/clone/pC31 pC31]</td>
 
<td>[http://dev.wormbase.org:8023/species/c_elegans/clone/pC31 pC31]</td>
−
<td>[http://dev.wormbase.org:8023/species/c_elegans/clone/pJMGoQLH pJMGoQLH]</td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/clone/pJMGoQLH pJMGoQLH]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/clone/JC8 JC8]
 +
</td>
 
</tr>
 
</tr>
  
Line 40: Line 49:
 
<td>Expr_profile</td>
 
<td>Expr_profile</td>
 
<td></td>
 
<td></td>
−
<td>[http://dev.wormbase.org:8023/species/c_elegans/expr_profile/R13H8.1#0--10 R13H8.1]</td>
+
<td>[http://dev.wormbase.org:8023/species/c_elegans/expr_profile/R13H8.1 R13H8.1]</td>
 
</tr>
 
</tr>
  
Line 47: Line 56:
 
<td></td>
 
<td></td>
 
<td>
 
<td>
−
<nowiki>http://dev.wormbase.org:8023/species/c_elegans/expression_cluster/[cgc5767]:cluster_88#01243--10</nowiki><br />
+
<nowiki>http://dev.wormbase.org:8023/species/c_elegans/expression_cluster/[cgc5767]:cluster_88</nowiki><br />
−
<nowiki>http://dev.wormbase.org:8023/species/c_elegans/expression_cluster/WBPaper00030839:Larval_A_Class#01243--10</nowiki>
+
<nowiki>http://dev.wormbase.org:8023/species/c_elegans/expression_cluster/WBPaper00030839:Larval_A_Class</nowiki>
 
</td>
 
</td>
 
</tr>
 
</tr>
Line 56: Line 65:
 
<td></td>
 
<td></td>
 
<td>
 
<td>
−
[http://dev.wormbase.org:8023/species/c_elegans/feature/WBsf000753#01--10 WBsf000753]<br />
+
[http://dev.wormbase.org:8023/species/c_elegans/feature/WBsf000753 WBsf000753]<br />
−
[http://dev.wormbase.org:8023/species/c_elegans/feature/WBsf217028#01--10 WBsf217028]<br />
+
[http://dev.wormbase.org:8023/species/c_elegans/feature/WBsf217028 WBsf217028]<br />
−
[http://dev.wormbase.org:8023/species/c_elegans/feature/WBsf027925#01--10 WBsf260684]
+
[http://dev.wormbase.org:8023/species/c_elegans/feature/WBsf027925 WBsf260684]
 
</td>
 
</td>
 
</tr>
 
</tr>
  
 
<tr>
 
<tr>
−
<td>Feature_data</td>
+
<td>Gene*</td>
−
<td></td>
 
−
<td></td>
 
−
</tr>
 
−
 
 
−
<tr>
 
−
<td>Gene</td>
 
−
<td></td>
 
 
<td></td>
 
<td></td>
 +
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/gene/WBGene00006763 unc-26]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/gene/WBGene00000912 daf-16]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/gene/WBGene00000898 daf-2]<br />
 +
</td>
 
</tr>
 
</tr>
  
Line 77: Line 84:
 
<td>Gene_class</td>
 
<td>Gene_class</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/resources/gene_class/unc unc]<br />
 +
[http://dev.wormbase.org:8023/resources/gene_class/let let]
 +
</td>
 
</tr>
 
</tr>
  
Line 83: Line 93:
 
<td>Gene_cluster</td>
 
<td>Gene_cluster</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/gene_cluster/HIS3_cluster HIS3_cluster]
 +
</td>
 
</tr>
 
</tr>
  
Line 89: Line 101:
 
<td>Gene_regulation</td>
 
<td>Gene_regulation</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/gene_regulation/WBPaper00027631_tbx-2 WBPaper00027631_tbx-2]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/gene_regulation/WBPaper00037674_hrg-1.b WBPaper00037674_hrg-1.b]
 +
</td>
 
</tr>
 
</tr>
  
Line 95: Line 110:
 
<td>GO_term</td>
 
<td>GO_term</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/go_term/GO:0032502 GO:0032502]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/go_term/GO:0005525 GO:0005525]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/go_term/GO:0055114 GO:0055114](880 motifs)<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/go_term/GO:0018996 GO:0018996](6 phenotypes)<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/go_term/GO:0043058 GO:0043058](16 Anatomy Terms)
 +
</td>
 
</tr>
 
</tr>
  
Line 101: Line 122:
 
<td>Homology_group</td>
 
<td>Homology_group</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/homology_group/COG5048 COG5048]
 +
</td>
 
</tr>
 
</tr>
  
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<td>Interaction</td>
 
<td>Interaction</td>
 
<td>[http://dev.wormbase.org:8023/species/c_elegans/interaction/WBInteraction0500570 WBInteraction0500570]</td>
 
<td>[http://dev.wormbase.org:8023/species/c_elegans/interaction/WBInteraction0500570 WBInteraction0500570]</td>
−
<td>[http://dev.wormbase.org:8023/species/c_elegans/interaction/WBInteraction0500328 WBInteraction0500328]</td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/interaction/WBInteraction0500328 WBInteraction0500328]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/interaction/WBInteraction0004639 WBInteraction0004639]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/interaction/WBInteraction0000105 WBInteraction0000105]
 +
</td>
 
</tr>
 
</tr>
  
Line 113: Line 140:
 
<td>Laboratory</td>
 
<td>Laboratory</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/resources/laboratory/EG EG]<br />
 +
[http://dev.wormbase.org:8023/resources/laboratory/VC VC](214627 Alleles)(Too large to load!! Crashes dev:8023 website)
 +
</td>
 
</tr>
 
</tr>
  
Line 119: Line 149:
 
<td>Life_stage</td>
 
<td>Life_stage</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/life_stage/embryo embryo]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/life_stage/adult adult]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/life_stage/all%20stages all stages]
 +
</td>
 
</tr>
 
</tr>
  
Line 125: Line 159:
 
<td>Microarray_results</td>
 
<td>Microarray_results</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/microarray_results/Aff_Y116F11.VV Aff_Y116F11.VV]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/microarray_results/Aff_Y105C5.DD Aff_Y105C5.DD]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/microarray_results/SMD_F44C4.3 SMD_F44C4.3](Multiple Microarrays)
 +
</td>
 
</tr>
 
</tr>
  
Line 131: Line 169:
 
<td>Molecule</td>
 
<td>Molecule</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/molecule/D010269 D010269]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/molecule/C027492 C027492]
 +
</td>
 
</tr>
 
</tr>
  
Line 137: Line 178:
 
<td>Motif</td>
 
<td>Motif</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/resources/motif/(AAATG)n (AAATG)n]<br />
 +
[http://dev.wormbase.org:8023/resources/motif/INTERPRO:IPR000010 INTERPRO:IPR000010]
 +
</td>
 
</tr>
 
</tr>
  
Line 143: Line 187:
 
<td>Operon</td>
 
<td>Operon</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/operon/CEOP2606 CEOP2606]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/operon/CEOP5546 CEOP5546]
 +
</td>
 
</tr>
 
</tr>
  
Line 149: Line 196:
 
<td>Paper</td>
 
<td>Paper</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/resources/paper/WBPaper00000031 WBPaper00000031]
 +
</td>
 
</tr>
 
</tr>
  
Line 155: Line 204:
 
<td>Pcr_oligo</td>
 
<td>Pcr_oligo</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
Oligo:
 +
*[http://dev.wormbase.org:8023/species/c_elegans/pcr_oligo/mv_F25B5.5_b mv_F25B5.5_b]<br />
 +
*[http://dev.wormbase.org:8023/species/c_elegans/pcr_oligo/sjj_C14A6.4_b sjj_C14A6.4_b]
 +
Oligo_set:
 +
*[http://dev.wormbase.org:8023/species/c_elegans/pcr_oligo/Aff_Y116F11.VV Aff_Y116F11.VV]
 +
PCR_product:
 +
*[http://dev.wormbase.org:8023/species/c_elegans/pcr_oligo/mv_F25B5.5 mv_F25B5.5]
 +
</td>
 
</tr>
 
</tr>
  
Line 161: Line 218:
 
<td>Person</td>
 
<td>Person</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/resources/person/WBPerson1482 Lincoln]<br />
 +
[http://dev.wormbase.org:8023/resources/person/WBPerson241 Todd]<br />
 +
[http://dev.wormbase.org:8023/resources/person/WBPerson10214 Abby]
 +
</td>
 
</tr>
 
</tr>
  
Line 167: Line 228:
 
<td>Phenotype</td>
 
<td>Phenotype</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/phenotype/WBPhenotype:0001652 WBPhenotype:0001652]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/phenotype/WBPhenotype:0000643 WBPhenotype:0000643]
 +
</td>
 
</tr>
 
</tr>
  
Line 173: Line 237:
 
<td>Picture</td>
 
<td>Picture</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>?</td>
 
</tr>
 
</tr>
  
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<td>Position_matrix</td>
 
<td>Position_matrix</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/position_matrix/WBPmat00000001 WBPmat00000001]
 +
</td>
 
</tr>
 
</tr>
  
 
<tr>
 
<tr>
−
<td>Protein</td>
+
<td>Protein*</td>
 
<td></td>
 
<td></td>
 
<td></td>
 
<td></td>
Line 191: Line 257:
 
<td>Rnai</td>
 
<td>Rnai</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/rnai/WBRNAi00000001 WBRNAi00000001]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/rnai/WBRNAi00022996 WBRNAi00022996]
 +
</td>
 
</tr>
 
</tr>
  
 
<tr>
 
<tr>
−
<td>Sequence</td>
+
<td>Sequence*</td>
 
<td></td>
 
<td></td>
 
<td></td>
 
<td></td>
Line 203: Line 272:
 
<td>Strain</td>
 
<td>Strain</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/strain/JU362 JU362]
 +
</td>
 
</tr>
 
</tr>
  
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<td>Structure_data</td>
 
<td>Structure_data</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/structure_data/WBStructure000876 WBStructure000876]
 +
</td>
 
</tr>
 
</tr>
  
 
<tr>
 
<tr>
−
<td>Transcript</td>
+
<td>Transcript*</td>
 
<td></td>
 
<td></td>
 
<td></td>
 
<td></td>
Line 221: Line 294:
 
<td>Transgene</td>
 
<td>Transgene</td>
 
<td></td>
 
<td></td>
−
<td></td>
+
<td>
 +
[http://dev.wormbase.org:8023/species/c_elegans/transgene/qIs48 qIs48]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/transgene/WBPaper00006024_Is007 WBPaper00006024_Is007]<br />
 +
[http://dev.wormbase.org:8023/species/c_elegans/transgene/WBPaper00034765Ex1 WBPaper00034765Ex1](Phenotypes populated)
 +
</td>
 
</tr>
 
</tr>
  
 
<tr>
 
<tr>
−
<td>Variation</td>
+
<td>Variation*</td>
 
<td></td>
 
<td></td>
 
<td></td>
 
<td></td>
 
</tr>
 
</tr>
 
</table>
 
</table>
 +
 +
*Curator talk/conference for major pages to determine required changes

Latest revision as of 23:28, 12 March 2012

ClassSparsely PopulatedDensely Populated
Analysis Pfam RNASeq_Hillier.L1_larva
Anatomy_term WBbt:0005200

WBbt:0005021
WBbt:0005175

Antibody http://dev.wormbase.org:8023/species/c_elegans/antibody/[cgc2813]:emb-9 http://dev.wormbase.org:8023/species/c_elegans/antibody/[cgc3186]:pgl-1
CDS* JC8.10c
Clone pC31

pJMGoQLH
JC8

Expr_pattern

Expr1789
Expr956

Expr_profile R13H8.1
Expression_cluster

http://dev.wormbase.org:8023/species/c_elegans/expression_cluster/[cgc5767]:cluster_88
http://dev.wormbase.org:8023/species/c_elegans/expression_cluster/WBPaper00030839:Larval_A_Class

Feature

WBsf000753
WBsf217028
WBsf260684

Gene*

unc-26
daf-16
daf-2
Gene_class

unc
let

Gene_cluster

HIS3_cluster

Gene_regulation

WBPaper00027631_tbx-2
WBPaper00037674_hrg-1.b

GO_term

GO:0032502
GO:0005525
GO:0055114(880 motifs)
GO:0018996(6 phenotypes)
GO:0043058(16 Anatomy Terms)

Homology_group

COG5048

Interaction WBInteraction0500570

WBInteraction0500328
WBInteraction0004639
WBInteraction0000105

Laboratory

EG
VC(214627 Alleles)(Too large to load!! Crashes dev:8023 website)

Life_stage

embryo
adult
all stages

Microarray_results

Aff_Y116F11.VV
Aff_Y105C5.DD
SMD_F44C4.3(Multiple Microarrays)

Molecule

D010269
C027492

Motif

(AAATG)n
INTERPRO:IPR000010

Operon

CEOP2606
CEOP5546

Paper

WBPaper00000031

Pcr_oligo

Oligo:

Oligo_set:

PCR_product:

Person

Lincoln
Todd
Abby

Phenotype

WBPhenotype:0001652
WBPhenotype:0000643

Picture ?
Position_matrix

WBPmat00000001

Protein*
Rnai

WBRNAi00000001
WBRNAi00022996

Sequence*
Strain

JU362

Structure_data

WBStructure000876

Transcript*
Transgene

qIs48
WBPaper00006024_Is007
WBPaper00034765Ex1(Phenotypes populated)

Variation*
  • Curator talk/conference for major pages to determine required changes
Retrieved from "https://wiki.wormbase.org/index.php?title=Example_Pages&oldid=13915"