Difference between revisions of "Design Specs: Evidence Handling"
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} | } | ||
− | ==use it in | + | ==use it in each class module== |
e.g. in lib/API/Object/Gene.pm | e.g. in lib/API/Object/Gene.pm |
Revision as of 20:43, 3 January 2012
API
the base function
by calling the _get_evidence($node,$type) subroutine in lib/API/Object.pm
argument $type is optional. If specified, only this type of evidence is retrieved.
returns a hash reference containing all the types of evidences to the right of the node
code snippet: sub _get_evidence { ... ... $data{$type}{$evidence}{id} = "$evidence"; $data{$type}{$evidence}{label} = "$label"; $data{$type}{$evidence}{class} = lc($class) if(defined $class); ... ... return %data ? \%data :undef; }
use it in each class module
e.g. in lib/API/Object/Gene.pm sub gene_ontology {
push @{ $data{$facet} }, { method => $1, evidence_code => {text=>"$evidence_code",evidence=>$self->_get_evidence($evidence_code)}, term => $self->_pack_obj($go_term), }; }