Data contained in WormMine

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Revision as of 19:07, 2 May 2013 by Jdmswong (talk | contribs)
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This lists all data sources contained in WormMine

Source Description Source Species Data mapping
GO Ontology terms and relationships comprising GO GO project website. N/A
GO Annotations Relationships between Genes and GO GO project website. Caenorhabditis elegans
Genomic sequences Fasta DNA sequences WormBase FTP Caenorhabditis elegans
Protein sequences Fasta peptide sequences WormBase FTP Caenorhabditis elegans
Gene locations Gene chromosomal coordinates WormBase FTP GFF3 Caenorhabditis elegans
Transcript locations Transcript chromosomal coordinates WormBase FTP GFF3 Caenorhabditis elegans
CDS locations CDS chromosomal coordinates WormBase FTP GFF3 Caenorhabditis elegans