Difference between revisions of "Concise Descriptions"

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*Curator ''cdc_curator''
 
*Curator ''cdc_curator''
 
*Curator History ''cdc_curhistory'' data has pgid, don't ever change this value or you'll be looking at the term info of a different pgid.
 
*Curator History ''cdc_curhistory'' data has pgid, don't ever change this value or you'll be looking at the term info of a different pgid.
*Description ''cdc_description'' : This is a dropdown, values are: Concise Description, Human Disease Relevance, Provisional Description, Sequence Features, Functional Pathway, Functional Physical Interaction, Biological Process, Molecular Function, Expression, .
+
*Description ''cdc_description'' : This is a dropdown, '''values are: Concise Description, Human Disease Relevance, Provisional Description, Sequence Features, Functional Pathway, Functional Physical Interaction, Biological Process, Molecular Function, Expression, Other Description.'''
*'''Description Text'''  
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*'''Description Text''' : '''Big Text field, expands as filled.'''
 
*Paper ''cdc_paper''
 
*Paper ''cdc_paper''
 
*Accession Evidence ''cdc_accession''
 
*Accession Evidence ''cdc_accession''
Line 15: Line 15:
 
*PGID ''no table''
 
*PGID ''no table''
 
*No dump ''cdc_nodump''
 
*No dump ''cdc_nodump''
* '''There is no field for data (the whole text for the description of human disease or whatever)'''
 

Revision as of 21:19, 25 July 2011

Building an Ontology Annotator interface for concise description curation

  • Curation starts by querying for a gene, wbgene is an autocomplete (not a dropdown), the term info is populated from the gene info from the gin_ tables, not an OBO file.
  • Querying for a gene brings up data from postgres or tells you there are no matches. To make a new annotation, click the New button to generate curator, date, pgid, and curator history.
  • Order and description of fields for the Concise Description OA (name of postgres table in italics):
  • WBGene cdc_wbgene
  • Curator cdc_curator
  • Curator History cdc_curhistory data has pgid, don't ever change this value or you'll be looking at the term info of a different pgid.
  • Description cdc_description : This is a dropdown, values are: Concise Description, Human Disease Relevance, Provisional Description, Sequence Features, Functional Pathway, Functional Physical Interaction, Biological Process, Molecular Function, Expression, Other Description.
  • Description Text : Big Text field, expands as filled.
  • Paper cdc_paper
  • Accession Evidence cdc_accession
  • Last Updated cdc_lastupdate
  • PGID no table
  • No dump cdc_nodump