Difference between revisions of "Caltech documentation"

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<div style="column-count:3;-moz-column-count:3;-webkit-column-count:3">
 
<div style="column-count:3;-moz-column-count:3;-webkit-column-count:3">
 
*[[Antibody]]
 
*[[Antibody]]
 +
*[[Automated gene descriptions 2.0]]
 
*[[Concise Descriptions]]
 
*[[Concise Descriptions]]
 
*[[Construct]]
 
*[[Construct]]
 +
*[[Evidence Code Ontology]]
 +
*[[Expression Cluster]]
 
*[[Expression Pattern]]
 
*[[Expression Pattern]]
 
*[[Gene Class Descriptions]]
 
*[[Gene Class Descriptions]]
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*[[Gene-Paper Associations]]
 
*[[Gene-Paper Associations]]
 
*[[Gene Regulation]]
 
*[[Gene Regulation]]
 +
*[[Generation of automated descriptions]]
 +
*[[Genotype]]
 
*[[Life_Stage]]
 
*[[Life_Stage]]
 
*[[Molecule]]
 
*[[Molecule]]
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*[[Physical Interactions]]
 
*[[Physical Interactions]]
 
*[[Pictures]]
 
*[[Pictures]]
 +
*[[Relations Ontology]]
 
*[[RNAi]]
 
*[[RNAi]]
 
*[[Sequence Feature]]
 
*[[Sequence Feature]]
 +
*[[Strain]]
 
*[[Topic_pages]]
 
*[[Topic_pages]]
 
*[[Transgenes]]
 
*[[Transgenes]]
 
*[[Disease and Drugs]]
 
*[[Disease and Drugs]]
 
*[[Drugs]]
 
*[[Drugs]]
 +
*[[VariationConciseDescriptions | Variation Concise Descriptions]]
 
</div>
 
</div>
  
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*[[Phenotype Ontology Development]]
 
*[[Phenotype Ontology Development]]
 
*[[Community Curation]]
 
*[[Community Curation]]
 +
*[[LEGO Curation]]
  
 
==Curation Progress==
 
==Curation Progress==
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* [[Linking_script_pipeline | Linking scripts]]
 
* [[Linking_script_pipeline | Linking scripts]]
 
* [[Entity classes and problems]]  
 
* [[Entity classes and problems]]  
** [[Papers that have been markedup]]
+
** [[Example marked up papers]]
 
** [[Markup excerpts]]
 
** [[Markup excerpts]]
 
*[[Future Entities for markup]]
 
*[[Future Entities for markup]]

Latest revision as of 17:36, 25 April 2023


First-pass flagging

Automation and Text Mining Approaches

Citace

Datatype

Paper Categorization

Paper ID Conversion CGI

Working Group

Curation Progress

postgres

Caltech weekly meetings

Conference Calls

Phenote

Ontology Annotator

Textpresso

SVMs for First Pass Curation

GSA markup

User Guide 2010

Table of Contents

Interesting, Not-yet-modelled Data Index

INDI


Requested details for the Citace upload report

Citace_upload_report

Release note requests from Caltech

Release note requests