Difference between revisions of "Caenorhabditis briggsae"
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+ | __TOC__ | ||
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+ | == Introduction == | ||
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''Caenorhabditis briggsae'' is a hermaphroditic species closely related to ''C. elegans'' (i.e., a fellow member of the Elegans group).<br> | ''Caenorhabditis briggsae'' is a hermaphroditic species closely related to ''C. elegans'' (i.e., a fellow member of the Elegans group).<br> | ||
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1. A general [http://www.briggsae.org/ ''C. briggsae'' research page]. | 1. A general [http://www.briggsae.org/ ''C. briggsae'' research page]. | ||
− | 2. A [http://wormbase.org/db/seq/gbrowse/c_briggsae/ genome browser gateway] for the current (CB3) | + | 2. A [http://wormbase.org/db/seq/gbrowse/c_briggsae/ genome browser gateway] for the current assembly (release CB3) at [http://www.wormbase.org WormBase], along with another [http://wormbase.org/db/seq/gbrowse/c_briggsae_cb25/ gateway] for the former assembly (release cb25.agp8).<br> |
3. A [http://genome.ucsc.edu/cgi-bin/hgGateway?org=C.+briggsae genome browser gateway] at the [http://genome.ucsc.edu UC Santa Cruz Genome Center]. | 3. A [http://genome.ucsc.edu/cgi-bin/hgGateway?org=C.+briggsae genome browser gateway] at the [http://genome.ucsc.edu UC Santa Cruz Genome Center]. | ||
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7. A WormBook [http://www.wormbook.org/chapters/www_Cbriggsaemethods/Cbriggsaemethods.html methods chapter].<br> | 7. A WormBook [http://www.wormbook.org/chapters/www_Cbriggsaemethods/Cbriggsaemethods.html methods chapter].<br> | ||
− | 8. Live [http://www.wormbase.org/db/gene/strain?query=briggsae;class=Strain strains] available from the [http://www.cbs.umn.edu/CGC/ CGC stock center]. | + | 8. Live [http://www.wormbase.org/db/gene/strain?query=briggsae;class=Strain strains] available from the [http://www.cbs.umn.edu/CGC/ CGC stock center].<br> |
+ | 9. A [http://snp.wustl.edu/snp-research/c-briggsae/ SNP project page] from the [http://genome.wustl.edu Washington University Genome Sequencing Center] (WU-GSC). | ||
+ | 10. A [http://genome.wustl.edu/genome.cgi?GENOME=Caenorhabditis%20briggsae genome page] at WU-GSC.<br> | ||
− | + | 11. Another [http://www.sanger.ac.uk/Projects/C_briggsae/ genome page] at the [http://www.sanger.ac.uk Sanger Institute]. | |
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+ | 12. An [http://en.wikipedia.org/wiki/Caenorhabditis_briggsae article] at [http://www.wikipedia.org Wikipedia]. | ||
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+ | == Genome Details == | ||
+ | |||
+ | Sex Determination: androdioecious | ||
− | + | Haploid No. chromosomes: 6 (5 autosomes, XO) | |
+ | == Identifiers == | ||
− | + | Proteins: BP:.* | |
− | + | [[Category:User Guide]] | |
+ | [[Category:Other species]] |
Latest revision as of 15:46, 15 December 2011
Contents
Introduction
Caenorhabditis briggsae is a hermaphroditic species closely related to C. elegans (i.e., a fellow member of the Elegans group).
It has the following Web sources of information:
1. A general C. briggsae research page.
2. A genome browser gateway for the current assembly (release CB3) at WormBase, along with another gateway for the former assembly (release cb25.agp8).
3. A genome browser gateway at the UC Santa Cruz Genome Center.
4. A review article at WormBook.
5. A research article describing the genomic sequencing of C. briggsae, in PLoS Biology.
6. A subsequent article in PLoS Biology describing chromosomal orientation and synteny of the C. briggsae genomic sequence, and the current CB3 genome assembly.
7. A WormBook methods chapter.
8. Live strains available from the CGC stock center.
9. A SNP project page from the Washington University Genome Sequencing Center (WU-GSC).
10. A genome page at WU-GSC.
11. Another genome page at the Sanger Institute.
Genome Details
Sex Determination: androdioecious
Haploid No. chromosomes: 6 (5 autosomes, XO)
Identifiers
Proteins: BP:.*