Difference between revisions of "CSHL documentation"

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** [[GFF3 features (C. elegans)]] - ''GFF3 features included in the C. elegans GFF3 file''
 
** [[GFF3 features (C. elegans)]] - ''GFF3 features included in the C. elegans GFF3 file''
 
** [[GFF3 features (C. briggsae)]] - ''GFF3 features included in the C. briggsae GFF3 file''
 
** [[GFF3 features (C. briggsae)]] - ''GFF3 features included in the C. briggsae GFF3 file''
* [[GFF3 Validation]] - ''GFF3 Validator Code Base''
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* [[GFF3 Validation|GFF3 validation]] - ''GFF3 Validator Code Base''
* [[N-Browse Installation & Interaction Data]] - ''Wormbase N-Browse nstallation and preparation of Wormbase interaction data''
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* [[N-Browse Installation & Interaction Data|N-Browse installation & interaction data]] - ''Wormbase N-Browse installation and preparation of Wormbase interaction data''
* [[Interaction Display in the Gene Page]] - ''Interaction Display in the Gene Page''
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* [[Interaction Display in the Gene Page|Interaction display in the gene page]] - ''Interaction Display in the Gene Page''
 
* [[BLAST/BLAT Page]] - ''BLAST/BLAT page and databases''
 
* [[BLAST/BLAT Page]] - ''BLAST/BLAT page and databases''
 
* [[Importing Protein Structure Data|Importing protein structure data]] - ''Importing protein structure data from TargetDB and PDB''
 
* [[Importing Protein Structure Data|Importing protein structure data]] - ''Importing protein structure data from TargetDB and PDB''

Revision as of 17:32, 17 December 2007

The WormBase Cold Spring Harbor team is in charge of developing, maintaining, and hosting WormBase. This page contains links to documentation relating to those topics.

Development

Administration

Hardware

General Admin

Virtual Machines / Freezes

Developer Tools


Reimplementation

Hardware platform

Software platform

Administration

Load balancing and Failover

Development notes by release

As part of the formal development strategy at WormBase, software freezes occur on the Wednesday before the release of each new database. This corresponds with the CSHL WormBase conference call.

For a new feature to enter production, developers must send an email to cshl@wormbase.org by the software freeze deadline briefly describing the new feature and any new module or database requirements. This section collates those notes for easy access