Difference between revisions of "Automated gene descriptions 2.0"

From WormBaseWiki
Jump to navigationJump to search
Line 18: Line 18:
  
 
====WS278====
 
====WS278====
 +
 +
==WB Grant 2022==
 +
*We will continue to maintain and improve the existing pipeline for automated gene descriptions
 +
*We will explore a new algorithm/technology to generate gene descriptions as this will also benefit the project at the Alliance of Genome Resources for the 6 other species
 +
*We will work on retiring the current WormBase pipeline to consolidate and unify the software for C. elegans gene descriptions as currently users see different descriptions at the Alliance and WormBase for the same gene

Revision as of 18:45, 21 August 2022

Data types

Timeline

Information poor genes

Expression cluster data

Meeting documents

Changes by WB release

WS280

  1. Switched to GAF 2.2 as source file for GO based descriptions
  2. Included qualifiers in descriptions

WS279

WS278

WB Grant 2022

  • We will continue to maintain and improve the existing pipeline for automated gene descriptions
  • We will explore a new algorithm/technology to generate gene descriptions as this will also benefit the project at the Alliance of Genome Resources for the 6 other species
  • We will work on retiring the current WormBase pipeline to consolidate and unify the software for C. elegans gene descriptions as currently users see different descriptions at the Alliance and WormBase for the same gene