Difference between revisions of "Author Curation"

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2. Manually via author-paper verification
 
2. Manually via author-paper verification
 
   Authors are emailed once a month (2nd or 3rd Thursday)?
 
   Authors are emailed once a month (2nd or 3rd Thursday)?
 +
  /home/cecilia/UPLOAD/new-upload/email_connected_authors.pl -> /home/postgres/work/pgpopulation/pap_papers/author_person/email_connected_authors.pl
  
 
3. Script that attempts to match authors to existing persons
 
3. Script that attempts to match authors to existing persons
 
   This script runs once a week (every Friday)?
 
   This script runs once a week (every Friday)?
 +
  /home/cecilia/UPLOAD/new-upload/connect_single_match_authors_and_get_histogram.pl -> /home/postgres/work/pgpopulation/pap_papers    /author_person/connect_single_match_authors_and_get_histogram.pl
  
 
4. Script that attempts to match authors to persons by incorporating information about labs and lineage
 
4. Script that attempts to match authors to persons by incorporating information about labs and lineage
 +
  /home/cecilia/UPLOAD/new-upload/verify_by_labs_or_lineage.pl -> /home/postgres/work/pgpopulation/pap_papers/author_person/verify_automatically/verify_by_labs_or_lineage.pl

Revision as of 23:06, 30 April 2011

Author Curation

Author-Person Connections

Author-Person connections are made via several pipelines:

1. Manually by Cecilia

2. Manually via author-paper verification

 Authors are emailed once a month (2nd or 3rd Thursday)?
 /home/cecilia/UPLOAD/new-upload/email_connected_authors.pl -> /home/postgres/work/pgpopulation/pap_papers/author_person/email_connected_authors.pl

3. Script that attempts to match authors to existing persons

 This script runs once a week (every Friday)?
 /home/cecilia/UPLOAD/new-upload/connect_single_match_authors_and_get_histogram.pl -> /home/postgres/work/pgpopulation/pap_papers    /author_person/connect_single_match_authors_and_get_histogram.pl

4. Script that attempts to match authors to persons by incorporating information about labs and lineage

 /home/cecilia/UPLOAD/new-upload/verify_by_labs_or_lineage.pl -> /home/postgres/work/pgpopulation/pap_papers/author_person/verify_automatically/verify_by_labs_or_lineage.pl