Difference between revisions of "Attaching Genes to Papers"
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| + | The script that associates genes based upon abstracts does miss some genes because of the way they're expressed in the abstract. | ||
Revision as of 18:48, 9 November 2010
Gene Associations Based Upon Abstracts
When papers are added to postgres using the Enter New Papers function of the Paper Editor, the corresponding abstracts are scanned, via a script, for matches to loci, sequence names, and synonyms.
Postgres tables used for this are:
gin_locus
gin_seqname
gin_synonyms
To view the contents of these tables, perform the following type of query using the referenceform.cgi:
SELECT * FROM gin_locus;
Updating the script:
The script that associates genes based upon abstracts does miss some genes because of the way they're expressed in the abstract.
Back to 2010_-_Paper_Pipeline:_Documentation_and_Instructions
