All OA tables

From WormBaseWiki
Revision as of 01:02, 4 October 2013 by Kyook (talk | contribs) (Created page with '===Molecule mop_tables=== {| border="1" cellpadding="2" cellspacing="2" {{table}} |+'''postgres tables for the Molecule class<br> dumper on tazendra at karen/Molecule/dump_molecu…')
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigationJump to search

Molecule mop_tables

postgres tables for the Molecule class
dumper on tazendra at karen/Molecule/dump_molecule_ace.pl
Model tag table type OA label tab ontology_type ontology_table cross table population script comment
pgonly mop_id not a table pgid all* - - - WBMol: $molId = &pad8Zeros($newPgid)
pgonly mop_timestamp not a table none - - - -
pgonly mop_curator dropdown Curator all - - - same values in all OA curation tables
Name mop_name text Name all - - - WBMolID -added after tables were built
Public_name mop_publicname bigtext Public_name all - - -
Synonym mop_synonym bigtext Synonyms all - - -
DB_info mop_molecule text MeSH / CTD or default all - - - use MeSh ID here
originally used as Name
DB_info mop_chemi text CasRN all - - -
DB_info mop_chebi ontology ChEBI_id all obo chebi
DB_info mop_kegg text Kegg compound (Acc#) all - - -
Remark mop_remark bigtext Remark all - - -
Reference mop_paper multiontology WBPaper all WBPaper pap_tables -
Molecule_use mop_moleculeuse bigtext Molecule use all - - -
Not in model mop_gotarget multiontology GO target all obo goid -
Not in model mop_genetarget multiontology Gene target all WBGene gin_tables -
DB_info mop_smmid text SMID-DB all - - -
Gene_regulation grg_moleculeregulator multiontology Molecule Regulator GENEREG tab3 Molecule mop_tables -
WBProcess pro_molecule multiontology Molecule PROCESS tab1 Molecule mop_tables -
Phenotype app_molecule multiontology Molecule PHENOTYPE tab2 Molecule mop_tables -
RNAi rna_molecule multiontology Molecule RNAi tab2 Molecule mop_ tables -
Interaction int_otheronetype
int_othertwotype
dropdown Effected other type
Affected other type
INTERACTION tab4 - - -