Administration:Installing WormMine
From WormBaseWiki
Contents
Requirements
Hardware
Linux
- 8 cores
- 24GB RAM
- ~ 1TB storage
Software
Necessary software and versions:
| Software | Minimum Version | Purpose |
|---|---|---|
| Git | 1.7 | check out and update source code |
| Java SDK | 6.0 | build and use InterMine |
| Ant | 1.8 | invokes the InterMine build |
| Tomcat | 6.0.29 | website |
| PostgreSQL | 8.3 | database |
| Perl | 5.8.8 | run build scripts |
Installation / configuration
Dependencies
Git
Java
Ant
Tomcat
PostgreSQL
Perl
Download and Install WormMine
Navigate into the folder you want to install WormMine
Download code from Git:
> git clone git@github.com:WormBase/intermine.git Cloning into intermine... remote: Counting objects: 378842, done. remote: Compressing objects: 100% (78542/78542), done. remote: Total 378842 (delta 233731), reused 377487 (delta 232710) Receiving objects: 100% (378842/378842), 684.97 MiB | 9.16 MiB/s, done. Resolving deltas: 100% (233731/233731), done.
