Difference between revisions of "Administration:Installing WormMine"
From WormBaseWiki
Jump to navigationJump to search| Line 25: | Line 25: | ||
|} | |} | ||
| − | + | = Installation / configuration = | |
| − | + | == Dependencies == | |
| − | + | === Git === | |
| − | + | === Java === | |
| − | + | === Ant === | |
| − | ==== | + | === Tomcat === |
| − | ==== | + | === PostgreSQL === |
| + | === Perl === | ||
| + | == Download and Install WormMine == | ||
| + | |||
| + | Navigate into the folder you want to install WormMine | ||
| + | |||
| + | Download code from Git: | ||
| + | > '''git clone git@github.com:WormBase/intermine.git''' | ||
| + | <nowiki>Cloning into intermine... | ||
| + | remote: Counting objects: 378842, done. | ||
| + | remote: Compressing objects: 100% (78542/78542), done. | ||
| + | remote: Total 378842 (delta 233731), reused 377487 (delta 232710) | ||
| + | Receiving objects: 100% (378842/378842), 684.97 MiB | 9.16 MiB/s, done. | ||
| + | Resolving deltas: 100% (233731/233731), done. | ||
| + | </nowiki> | ||
Revision as of 16:49, 14 August 2013
Contents
Requirements
Hardware
Linux
- 8 cores
- 24GB RAM
- ~ 1TB storage
Software
Necessary software and versions:
| Software | Minimum Version | Purpose |
|---|---|---|
| Git | 1.7 | check out and update source code |
| Java SDK | 6.0 | build and use InterMine |
| Ant | 1.8 | invokes the InterMine build |
| Tomcat | 6.0.29 | website |
| PostgreSQL | 8.3 | database |
| Perl | 5.8.8 | run build scripts |
Installation / configuration
Dependencies
Git
Java
Ant
Tomcat
PostgreSQL
Perl
Download and Install WormMine
Navigate into the folder you want to install WormMine
Download code from Git:
> git clone git@github.com:WormBase/intermine.git Cloning into intermine... remote: Counting objects: 378842, done. remote: Compressing objects: 100% (78542/78542), done. remote: Total 378842 (delta 233731), reused 377487 (delta 232710) Receiving objects: 100% (378842/378842), 684.97 MiB | 9.16 MiB/s, done. Resolving deltas: 100% (233731/233731), done.
