Difference between revisions of "AceOjbect Redesign Page"

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Revision as of 22:06, 14 July 2010

The A - Z of Ace Model and Redesign Page

No. Name API Template People Comment/Brief Description Link
1 2_point_data No distinct API needed at this time; partner class of Gene and possibly Variation, Rearrangement, Locus
2 3d_data
3 Accession_number No distinct API needed at this time; accessed through XREFed classes.
4 Analysis
5 Anatomy_function
6 Anatomy_name No distinct API needed at this time; support class for Anatomy_term.
7 Anatomy_term
8 Antibody
9 AO_code
10 Atlas No distinct API needed at this time.
11 Author Person class takes precendence.
12 Balancer No distinct API necessary at this time
13 CDS No distinct API necessary at this time; support class of Gene and Sequence; accessed through XREFed classes.
14 Cell
15 Cell_group
16 Clone
17 Condition
18 Contig
19 Database No distinct API needed at this time; accessed from XREFed classes.
20 Database_field No distinct API needed at this time; accessed from XREFed classes.
21 Expression_cluster
22 Expr_pattern
23 Expr_profile
24 Feature
25 Feature_data
26 Gene mostly done in the progress Norie and Abby will schedule a content/UI call soon http://beta.wormbase.org/reports/gene/WBGene00006763
27 Gene_class
28 Gene_cluster
29 Gene_name No distinct API needed at this time; support class for Gene.
30 Gene_regulation
31 Genetic_code No distinct API necessary at this time.
32 GO_code
33 GO_term
34 Grid No API necessary; AceDB internals.
35 Grid_data No API necessary; AceDB internals.
36 Grid_row No API necessary; AceDB internals.
37 Homol_data No API necessary at this time; accessed from XREFed classes.
38 Homology_group
39 Interaction 80%? ? Norie ?
40 Interval_col_conf No API necessary; AceDB internals.
41 Jade No API necessary; AceDB internals.
42 Lab_Location No distinct API necessary at this time.
43 Laboratory
44 Library
45 Life_stage
46 Locus
47 ManyMap No API necessary; AceDB internals.
48 Map No API necessary; AceDB internals.
49 Map_error No API necessary; AceDB internals.
50 Map_offset No API necessary; AceDB internals.
51 Map_position
52 Mass_spec_experiment
53 Mass_spec_peptide
54 Method No distinct API needed at this time.
55 Microarray
56 Microarray_experiment
57 Microarray_results
58 Mixed_grid_row No API necessary; AceDB internals.
59 Molecule No API necessary at this time; I don't think this class even exists.
60 Motif 80%? ? Norie ?
61 Movie No API necessary; AceDB internals/accessed from XREFed classes.
62 Multi_counts No API necessary; AceDB internals.
63 MultiMap No API necessary; AceDB internals.
64 Multi_pt_data No API necessary at this time; accessed from XREFed classes.
65 Neurodata
66 Neuro_location
67 Oligo No distinct API necessary at this time; accessed through XREFed classes like PCR_product.
68 Oligo_set No distinct API necessary at this time; accessed through XREFed classes.
69 Operon
70 Paper 50% 50% Xiaoqi ? http://beta.wormbase.org/reports/paper/WBPaper00015392
71 PCR_product
72 Person 80%? ? Norie ?
73 Person_name No API needed at this time; support class for searching the Person class.
74 Phenotype 85% 85% Xiaoqi will schedule a call soon http://beta.wormbase.org/reports/phenotype/WBPhenotype:0000039
75 Phenotype_Assay No distinct API necessary at this time; support class of Phenotype; accessed through XREFed classes.
76 Phenotype_name No API needed at this time; support class for searching Phenotype.
77 Picture No API needed; AceDB internals.
78 Position_Matrix
79 Pos_neg_data No distinct API needed at this time; accessed through XREFed classes.
80 Protein 90% 90% Xiaoqi Content/UI call done on 07/08/10, rather simple model should be finish soon. http://beta.wormbase.org/reports/protein/WP:CE28239
81 Pseudogene
82 Rearrangement
83 ReconCellInfo No distinct API needed at this time.
84 Reconstruction
85 Reference No distinct API necessary at this time; this seems to be a helper class of Paper anyways.
86 RNAi
87 SAGE_experiment
88 SAGE_tag
89 Sequence 80% 80% Xiaoqi Content/UI call on 07/10/10, lots of feedback http://beta.wormbase.org/reports/sequence/JC8.10a
90 SK_map
91 SO_term No API necessary; AceDB internals.
92 Species
93 Strain 80%? ? Norie ?
94 Structure_data
95 Timepoint
96 Transcript No distinct API needed at this time; support class of Gene and Sequence; accessed through XREFed classes.
97 Transgene 80%? ? Norie ?
98 Transposon
99 Transposon_family No distinct API necessary at this time; support class of Transposon & variation; accessed through XREFed classes.
100 Variation 85% 85% Todd content/UI call finish on 06/25/10, will schedule another follow up call http://beta.wormbase.org/reports/variation/WBVar00182432
101 Variation_name No API necessary at this time; support class for Variation.
102 YH