Difference between revisions of "2016 Advisory Board Meeting"

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** What is the plan and timeline for incorporating the new database in the build? In curation workflows?
 
** What is the plan and timeline for incorporating the new database in the build? In curation workflows?
 
* WormBase / ParaSite integration + cross-resource tools (e.g. enrichment tool)
 
* WormBase / ParaSite integration + cross-resource tools (e.g. enrichment tool)
 +
* Efficiency improvements
 +
* Community curation (allele-phenotype, concise descriptions, etc.)
 +
* Text mining
 +
* SObA (Solr/Amigo/Cytoscape reuse)
 +
* Automated concise descriptions
 +
* Micropublications
 +
* Human disease / pathways
 +
* Genomics
  
 
= Agenda =
 
= Agenda =

Revision as of 18:40, 17 December 2015

The 2016 edition of the WormBase Scientific Advisory Board meeting will take place at Caltech on 4/5 Feb 2016.

Logistics

Attending

  • Hinxton
    • Paul Kersey, Matt Berriman, Kevin Howe, Bruce Bolt, Jane Lomax, Michael Paulini, Paul Davis, Gary Williams
  • OICR

Accommodation

  • Sarah Torres to arrange accommodation for non-locals

Travel

  • Hinxton
    • Will fly out on the 2/3 of Feb, and return on Sun 7th Feb (cheap flights)
  • OICR


Advisors

Project meeting

Scheduling

  • All-hands project meeting, or smaller discussion groups?
  • Before the SAB meeting or after?
    • A pre-meeting would allow us to refine the agenda of the SAB (although perhaps too late for that)
    • A post-meeting would allow us to set some goals based on comments/advise from the advisors
    • Hinxton folks have more time after the meeting

Discussion topics

  • Cross-site unification of documentation and code; what are our standards for documentation? For code?
  • Organisation, display and querying of RNASeq data (c.f. FlyBase)
  • Database migration
    • What is the plan and timeline for incorporating the new database in the build? In curation workflows?
  • WormBase / ParaSite integration + cross-resource tools (e.g. enrichment tool)
  • Efficiency improvements
  • Community curation (allele-phenotype, concise descriptions, etc.)
  • Text mining
  • SObA (Solr/Amigo/Cytoscape reuse)
  • Automated concise descriptions
  • Micropublications
  • Human disease / pathways
  • Genomics

Agenda

Thu 4th Feb

Fri 5th Feb