Difference between revisions of "2010.05 OICR WebDev Meeting"

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* Emailed dev list
 
* Emailed dev list
 
* Added caveat
 
* Added caveat
* '''Server need to copy over configuration files'''
+
 
 +
'''TODO'''
 +
* Need to copy over configuration stanzas to production configuration files
 +
** GBrowse-1.70
 +
** GBrowse-2.03
  
 
== GBrowse ==
 
== GBrowse ==

Revision as of 08:44, 8 May 2010

Meeting summary

BioMart

  • Abby: built WS205, migrated to new biomart machine

TODO

  • Abby: might be some configuration problems with Apache
  • TH: setting up as subdomain, virtual host

Development Update Pipeline

  • Norie: added support for mirroring pre-prepared GFF mysql databases fom Sanger

TODO

  • Continue update to WS214
  • GFF MySQL code to be tested with WS215

modENCODE

  • Xiaoqi: migrated current modENCODE data to production
  • Emailed dev list
  • Added caveat

TODO

  • Need to copy over configuration stanzas to production configuration files
    • GBrowse-1.70
    • GBrowse-2.03

GBrowse

  • Debugged various plugin issues

TODO

  • add initial landmark config
  • set up GBrowse 1.x @ OICR and update proxy

Rearchitecture

Database Connectivity

  • Xiaoqi: converting from lock based method to one checking status
  • Xiaoqi: code done next week or so.

API

  • Standardized data structure
  • Expanded class coverage
  • Norie working on additional classes
  • TH: need to prioritize classes



=

QA/QC meetings


Visit goals

  • Benchmarks
  • Tests
  • Documentation
  • Sanger Databases
  • Issue Tracker issues
  • OICR aceserver