Difference between revisions of "2008-SAB Meeting"

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= 2008 Scientific Advisory Board Meeting  =
 
= 2008 Scientific Advisory Board Meeting  =
  
Wellcome Trust Sanger Institute 21-23 May 2008  
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Wellcome Trust Sanger Institute 21-23 May 2008<br>
 
 
= Agenda  =
 
  
 
= Wednesday 21st May – Pre-meeting (WormBase staff only)  =
 
= Wednesday 21st May – Pre-meeting (WormBase staff only)  =
  
6:30 – 18:00 Put right the world  
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Put right the world
  
 
= Thursday 22nd May – Main Meeting (all)  =
 
= Thursday 22nd May – Main Meeting (all)  =
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*Introduction: Paul Sternberg ([[Media:1-2008-SAB-Sternberg.ppt|slides]])  
 
*Introduction: Paul Sternberg ([[Media:1-2008-SAB-Sternberg.ppt|slides]])  
*Website overview and future plans: Todd Harris ([http://www.wormbase.org/presentations/2008/SAB/2-SAB-Harris.ppt slides])  
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*Website overview and future plans: Todd Harris ([[Media:2-2008-SAB-Harris.ppt|slides]])  
 
*Genome Browser &amp; nGASP: Sheldon McKay ([[Media:3-2008-SAB-McKay.ppt|slides]])  
 
*Genome Browser &amp; nGASP: Sheldon McKay ([[Media:3-2008-SAB-McKay.ppt|slides]])  
 
*Build Process: Anthony Rogers ([[Media:4-2008-SAB-Rogers.ppt|slides]])  
 
*Build Process: Anthony Rogers ([[Media:4-2008-SAB-Rogers.ppt|slides]])  
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*Current methods and metrics: Paul Davis ([[Media:10-2008-SAB-Davis.ppt|slides]])  
 
*Current methods and metrics: Paul Davis ([[Media:10-2008-SAB-Davis.ppt|slides]])  
 
*Briggsae curation and SNPS: Darin Blasiar ([[Media:11-2008-SAB-Blasiar.ppt|slides]])  
 
*Briggsae curation and SNPS: Darin Blasiar ([[Media:11-2008-SAB-Blasiar.ppt|slides]])  
*Future curation: Anthony Rogers ([[Media:12-2008-SAB-Rogers2.ppt|slides]])  
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*Future curation: Anthony Rogers ([[Media:12-2008-SAB-Rogers2.ppt|slides]])<br>
*Grant review issues: John Spieth ([[Media:13-2008-SAB-Spieth2.ppt|slides]])
 
  
 
== 15:30 - Literature Curation  ==
 
== 15:30 - Literature Curation  ==
  
 +
*Textpresso-based Curation: Kimberly Van Auken ([[Media:16-2008-SAB-VanAuken.ppt|slides]])
 
*Overview;Phenotype Curation: Gary Schindelman ([[Media:14-2008-SAB-Schindelman.ppt|slides]])  
 
*Overview;Phenotype Curation: Gary Schindelman ([[Media:14-2008-SAB-Schindelman.ppt|slides]])  
 
*Generalizing Phenote: Juancarlos Chan ([[Media:15-2008-SAB-Chan.ppt|slides]])  
 
*Generalizing Phenote: Juancarlos Chan ([[Media:15-2008-SAB-Chan.ppt|slides]])  
*Textpresso-based Curation: Kimberly Van Auken ([[Media:16-2008-SAB-VanAuken.ppt|slides]])
 
 
*Genetics: Mary Ann Tuli ([[Media:17-2008-SAB-Tuli.ppt|slides]])  
 
*Genetics: Mary Ann Tuli ([[Media:17-2008-SAB-Tuli.ppt|slides]])  
 
*Cell-centric curation: Raymond Lee ([[Media:18-2008-SAB-Lee.ppt|slides]])  
 
*Cell-centric curation: Raymond Lee ([[Media:18-2008-SAB-Lee.ppt|slides]])  
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13:00 – Discussion
 
13:00 – Discussion
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[[Category:Meetings]]

Latest revision as of 17:09, 6 January 2011

2008 Scientific Advisory Board Meeting

Wellcome Trust Sanger Institute 21-23 May 2008

Wednesday 21st May – Pre-meeting (WormBase staff only)

Put right the world

Thursday 22nd May – Main Meeting (all)

9:30 - 11:00: Website, UI, Build, Orthology

  • Introduction: Paul Sternberg (slides)
  • Website overview and future plans: Todd Harris (slides)
  • Genome Browser & nGASP: Sheldon McKay (slides)
  • Build Process: Anthony Rogers (slides)
  • Comparative Analysis: Michael Han (slides)
  • Orthologs, Disease, Interactions: Norie De La Cruz (slides)
  • modENCODE & Chado migration (slides)

13:30 – 15:30 Sequence curation and analysis, other nematodes

  • Introduction: John Spieth (slides)
  • Curation Tool: Gary Williams (slides)
  • Current methods and metrics: Paul Davis (slides)
  • Briggsae curation and SNPS: Darin Blasiar (slides)
  • Future curation: Anthony Rogers (slides)

15:30 - Literature Curation

  • Textpresso-based Curation: Kimberly Van Auken (slides)
  • Overview;Phenotype Curation: Gary Schindelman (slides)
  • Generalizing Phenote: Juancarlos Chan (slides)
  • Genetics: Mary Ann Tuli (slides)
  • Cell-centric curation: Raymond Lee (slides)
  • Gene Regulation: Xioadong Wang (slides)

General Discussion

  • Coordination among sites
  • Quality control
  • Outreach
  • Database migration community annotation

Friday 23rd May

8:30 – 9:00 Advisors breakfast

9:30 – 12:00 Advisors summary report

12:00 – 13:00 Lunch

13:00 – Discussion