Project meeting agendas and minutes

From WormBaseWiki
Revision as of 10:06, 4 January 2010 by Arogers (talk | contribs)
Jump to navigationJump to search

January 2010 Advisory Board Meeting, Caltech

Advisors Attending (at least these): Tim Schedl, Mark Blaxter, Bill Gelbart, Mike Cherry, Robin Gasser

Genome Genes Cells Process invite Makedonka


Monday, January 11

0900 - 0915 Introduction and Charge to Advisors --Paul Sternberg

0915 - 1015 Website

Todd:

  • Usage
  • Staffing
  • Project management metrics & help desk enhancements
  • OICR migration
  • Frozen releases
  • Redesign preview

1030 - 1130 Sequence curation including all those genomes 

                   Sequence Curation C. elegans - Paul
                   Sequence Curation Tier II - 
                   RNAseq (RGASP) - Gary

1130 - 1200 Sequence display

1200 - 1300 Lunch

1300 - 1400 Literature curation 

                  progress
                  plans and automation -- Kimberly, Ruihua
                  Phenotype curation and ontology -- Jolene, Gary
                  Strains, alleles, sequence features etc Mary Ann - Ant

1400 - 1500 Cell pages, Process pages, Interaction pages - OICR, Raymond, Karen (process pages)

  • Cell anatomy function curation
  • Cell lineage information
  • Cell neural connectivity
  • Cell link in/out

1500 - 1600 Large-scale datasets -

  • microarrays & SPELL - Wen
  • modENCODE - Lincoln
  • non-modENCODE ChIP-seq and RNA-seq data
  • C.elegans strain resequencing (what should we do?) - Ant

lineageing and gene expression (Burglin, Waterston) -Raymond


1600 - 1645 Database issues (Ant) 

* Brief build overview
  - Data aggregation 
  - Mapping and cross reference creation
  - Similarity searches / orthology / synteny etc (mh to expand) : ensembl based stuff
  - Tier II builds (basically the same)
  - Tier III builds
  - Web database builds


1645 - 1700 Static pages and downloads

1700 - 1800 Overall Prioritization --Paul Sternberg

1800 Dinner


Tuesday January 11 0900 - 1200 Report and discussion with Advisors 

    Not sure where to put this, but don't want to forget to bring this up.
    How should WormBase handle meeting abstracts (other than the International meeting)?
    What meetings/abstracts should be included in WB?
    Should WormBase provide a submission form for topical and regional meetings to facilitate handling abstracts?

'Tuesday afternoon and Wednesday Project Meeting' Gene Pages 

   content and display
Retrieved from "https://wiki.wormbase.org/index.php?title=Project_meeting_agendas_and_minutes&oldid=3618"