Project meeting agendas and minutes

January 2010 Advisory Board Meeting, Caltech

Advisors Attending (at least these): Tim Schedl, Mark Blaxter, Bill Gelbart, Mike Cherry, Robin Gasser

Genome Genes Cells Process invite Makedonka

Monday, January 11

0900 - 0915 Introduction and Charge to Advisors --Paul Sternberg

0915 - 1015 Website

Todd:

• Usage
• Staffing
• Project management metrics & help desk enhancements
• OICR migration
• Frozen releases
• Redesign preview

1030 - 1130 Sequence curation including all those genomes

                   Sequence Curation C. elegans - Paul
                   Sequence Curation Tier II - 
                   RNAseq (RGASP) - Gary

1130 - 1200 Sequence display

1200 - 1300 Lunch

1300 - 1400 Literature curation

                  progress
                  plans and automation -- Kimberly, Ruihua
                  Phenotype curation and ontology -- Jolene, Gary

1400 - 1500 Cell pages, Process pages, Interaction pages - OICR, Raymond, Karen (process pages)

• Cell anatomy function curation
• Cell lineage information
• Cell neural connectivity
• Cell link in/out

1500 - 1600 Large-scale datasets -

• microarrays & SPELL - Wen
• modENCODE - Lincoln
• non-modENCODE ChIP-seq and RNA-seq data

lineageing and gene expression (Burglin, Waterston) -Raymond

1600 - 1645 Database issues (Ant)

* Brief build overview
  - Data aggregation 
  - Mapping and cross reference creation
  - Similarity searches / orthology / synteny etc (mh to expand) : ensembl based stuff
  - Tier II builds (basically the same)
  - Tier III builds
  - Web database builds

1645 - 1700 Static pages and downloads

1700 - 1800 Overall Prioritization --Paul Sternberg

1800 Dinner

Tuesday January 11 0900 - 1200 Report and discussion with Advisors

'Tuesday afternoon and Wednesday Project Meeting' Gene Pages

   content and display