Source and maintenance of non-WBGene info
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Jump to navigationJump to searchAceDB tag | Postgres table | Current - Nameserver nightly dump | Current - WS bimonthly release | Future - Geneace nightly dump | Future - WS bimonthly release | Use - Paper or meeting abstract gene connection | Use - OA data type curation | Use - OA term info | Use - Dumping scripts | Use -Text mining/SVM | Use - Updating GSA Lexicon | Comment |
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Variation | obo_name | yes | yes | no | no | yes | yes | no | no | no | no | Only select variations based on Method will be sent daily. |
Variation public_name | no | yes | yes | no | no | yes | yes | no | for Variation first pass | For Variation lexicon | In multiple OAs | |
Variation- Gene | no | yes | yes | no | no | no | yes | no | no | no | ||
Variation -Reference | no | yes | yes | no | no | no | yes | no | yes? | no | ||
Variation -Method | ||||||||||||
Status | no | yes | yes | no | no | no | yes | ? | no | no | ||
Rearrangement | no | yes | yes | no | no | yes | yes | no | no | yes | ||
Rearrangement -map | no | yes | yes | no | no | no | yes | no | no | no | ||
gene_inside | no | yes | yes | no | no | no | yes | no | no | no | ||
gene_outside | no | yes | yes | no | no | no | yes | no | no | no | ||
Strain | no | yes | yes | no | no | no | yes | no | no | yes | ||
Strain -genotype | no | yes | yes | no | no | no | yes | no | no | no | ||
Strain- location | no | yes | yes | no | no | no | yes | no | no | no | ||
Clone | no | yes | yes | no | no | yes (expr_pattern) | yes | no? | no | yes | ||
Clone -Type | no | yes | yes | no | no | no | yes | no | no | no | ||
Clone -Transgene | no | yes | yes | no | no | no | yes | no | no | no | ||
Clone -strain | no | yes | yes | no | no | no | yes | no | no | no | ||
Clone -general_remark | no | yes | yes | no | no | no | yes | no | no | no | ||
Clone -location | no | yes | yes | no | no | no | yes | no | no | no | ||
Clone -accession_number | no | yes | yes | no | no | no | yes | no | no | no | ||
Clone -reference | no | yes | yes | no | no | no | yes | no | no | no | ||
Transgene | trp_name | no | no | no | no | no | yes | yes | yes | no | no | |
Transgene public_name | trp_publicname | no | no | no | no | no | yes | yes | yes | yes | yes | |
Transgene synonym | trp_synonym | no | no | no | no | no | yes | yes | yes | no | no | |
Transgene Summary | trp_summary | no | no | no | no | no | no | yes | yes | no | no | |
Transgene paper | trp_paper | no | no | no | no | no | no | yes | yes | yes? | no |