Search results
From WormBaseWiki
Jump to navigationJump to searchCreate the page "WormBase Model:?Analysis" on this wiki! See also the search results found.
- New release of WormBase WS208, Wormpep208 and Wormrna208 Tue Oct 27 13:31:22 GMT 2009 http://www.wormbase.org/wiki/index.php/Release_Schedule5 KB (581 words) - 16:50, 21 December 2011
- New release of WormBase WS226 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:21 KB (2,346 words) - 11:15, 21 December 2011
- *Should we take minutes of Caltech WormBase group meetings and send around? *WormBase-wide conference call twice per month8 KB (1,282 words) - 17:08, 7 July 2011
- * WormBase uses EnsemblCompara and other methods (not aggregate method like DIOPT) * Orthology synchrony is a challenge; WormBase and FlyBase may need to pay special attention to orthology calls and discre12 KB (1,809 words) - 16:33, 1 March 2018
- * I could not find an ontology that was ready built to adopt; few genetic model organisms, of those, FB has the most useful. Other mods use controlled voca ...in genotypes, to support genotype-to-phenotype (G2P) data aggregation and analysis across diverse research communities and sources)for a cross-species genetic6 KB (982 words) - 15:33, 2 July 2015
- * Further discussed capturing/registering when a curator has reviewed a gene model but not made a change ** New db puts #model annotation of the edges of the graph, so does not currently support this.5 KB (741 words) - 10:57, 21 August 2015
- * Eppendorf tube openers with WormBase logo? *[http://wiki.wormbase.org/index.php/First-pass_flagging_pipelines#Author_first-pass_form_revision12 KB (1,930 words) - 17:12, 1 February 2018
- ...r><br>Release notes on the web:<br>-------------------------<br>http://www.wormbase.org/wiki/index.php/Release_Schedule<br><br>Genome sequence composition:<br> ...open your database, e.g.<br> type 'xace /users/yourname/wormbase' at the command prompt.<br><br>5. See the acedb website for more informatio11 KB (1,614 words) - 16:52, 21 December 2011
- Main outline [https://docs.google.com/a/wormbase.org/document/d/1l6pExlCMI88pi_-djk8jt7IzNsMDV-nIEY9Z1gBNh-A/edit here]- not [https://docs.google.com/a/wormbase.org/document/d/1mAxrqVIhxDNpkTUBmtu12sAo58pEG763tgASlzy-3JU/ here]10 KB (1,453 words) - 18:52, 4 February 2015
- *Prepopulation: Display all (key?) experimental info on gene from WormBase, some Textpresso info like "ABC-1 encodes..." ***Model changes7 KB (1,047 words) - 15:34, 4 April 2013
- ***Integrated interaction model, genetic interaction ontology ***Need to update Gene expression model to accommodate Epic dataset (John Murray), 3D movies (Bill Mohler), and sin12 KB (1,878 words) - 15:55, 6 September 2012
- New release of WormBase WS223, Wormpep223 and Wormrna223 Mon Jan 24 12:12:08 GMT 2011 genomes DIR - contains a sub dir for each WormBase species with sequence, gff, and agp data15 KB (1,610 words) - 11:20, 21 December 2011
- New release of WormBase WS221, Wormpep221 and Wormrna221 Tue Nov 23 12:32:16 GMT 2010 genomes DIR - contains a sub dir for each WormBase species with sequence, gff, and agp data17 KB (1,758 words) - 16:47, 21 December 2011
- New release of WormBase WS228 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:14 KB (1,572 words) - 10:37, 11 November 2011
- New release of WormBase WS227 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:15 KB (1,738 words) - 11:20, 21 December 2011
- *We can make a special note for each gene page, but the people using batch analysis could not catch that easily. * Will work on GO-CAMs and build a relevant model(s)9 KB (1,369 words) - 22:47, 5 August 2020
- <pre>New release of WormBase WS122, Wormpep122 and Wormrna122 March 26th 2004 http://www.sanger.ac.uk/Projects/C_elegans/WORMBASE6 KB (721 words) - 11:18, 21 December 2011
- **Groups will switch to using common data model that works for all and common ontology/ontologies in the near future. ** Expression pattern curation needs genetic sex; needs a model at the Alliance for capturing sex5 KB (880 words) - 15:40, 3 September 2020
- * Testing at juancarlos.wormbase.org (from there go to Tools > Ontology Browser) ** Add a Reactome display to WormBase?10 KB (1,474 words) - 15:54, 30 April 2014
- *How to use annotation extensions for LEGO model? *WormBase workshop8 KB (1,161 words) - 16:34, 7 March 2013