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Create the page "Briggsae genomic" on this wiki! See also the search results found.

• WS284
  ...- G_SPECIES.BIOPROJECT.WS284.genomic.fa.gz - Unmasked genomic DNA ...84.genomic_masked.fa.gz - Hard-masked (repeats replaced with Ns) genomic DNA
  17 KB (1,841 words) - 21:54, 11 May 2023
• WS224
  human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins. sequences/dna - WormBase dna data genomic sequence (raw, soft_masked masked), agp
  15 KB (1,583 words) - 11:13, 21 December 2011
• WS222
  human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins. sequences/dna - WormBase dna data genomic sequence (raw, soft_masked masked), agp
  15 KB (1,647 words) - 10:06, 22 December 2010
• WS226
  - G_SPECIES.WS226.genomic.fa.gz - Unmasked genomic DNA ...S226.genomic_masked.fa.gz - Hard-masked (repeats replaced with Ns) genomic DNA
  21 KB (2,346 words) - 11:15, 21 December 2011
• WS223
  human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins. sequences/dna - WormBase dna data genomic sequence (raw, soft_masked masked), agp
  15 KB (1,610 words) - 11:20, 21 December 2011
• BASIC PROTOCOL 11: DOWNLOADING A BATCH OF SEQUENCES
  ...Genome Dumper can extract data from either the ''C. elegans'' or the ''C. briggsae'' genome. Pick the species to be scanned from the Species menu. ...utomatically translate classical gene names (such as ''zyg-1'') into their genomic sequence equivalents (such as F59E12.2), so translating classical gene list
  4 KB (687 words) - 19:56, 11 August 2010
• WS225
  human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins. sequences/dna - WormBase dna data genomic sequence (raw, soft_masked masked), agp
  16 KB (1,674 words) - 11:38, 20 April 2011
• WS221
  human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins. sequences/dna - WormBase dna data genomic sequence (raw, soft_masked masked), agp
  17 KB (1,758 words) - 16:47, 21 December 2011
• WS193
  human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins. xii) best_blastp_hits_brigprot.WS193.gz - for each C. briggsae protein, lists Best blastp match to
  8 KB (944 words) - 16:52, 21 December 2011
• WS218
  human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins. sequences/dna - WormBase dna data genomic sequence (raw, soft_masked
  15 KB (1,756 words) - 11:21, 21 December 2011
• WS219
  human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins. sequences/dna - WormBase dna data genomic sequence (raw, soft_masked masked), agp
  15 KB (1,622 words) - 11:11, 21 December 2011
• WS174
  human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins. xii) best_blastp_hits_brigprot.WS174.gz - for each C. briggsae protein, lists Best blastp match to
  8 KB (938 words) - 10:54, 21 December 2011
• NGASP
  ...ditis'' genomes to five when added to the existing ''C. elegans'' and ''C. briggsae'' genome sequences. ...As, while 2) a 'full set' will contain all curated genes from the selected genomic regions. This competition differs from the ''Drosophila'' GASP and human EG
  21 KB (3,246 words) - 23:20, 13 August 2010
• Glossary of terms
  ...levels of evolutionary relatedness: groups built solely from C. elegans-C. briggsae ortholog pairs (~13,000 "InP_Cae_*" groups); those built from metazoan orth ...overlapping genes and the corresponding locations are usually the primary genomic targets of an RNAi experiment. Note that it is possible for a probe to have
  8 KB (1,256 words) - 00:26, 31 August 2010
• WS220
  human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins. sequences/dna - WormBase dna data genomic sequence (raw, soft_masked masked), agp
  16 KB (1,762 words) - 11:10, 21 December 2011
• WormBase Paper Categorization
  **Genomic classification of protein-coding gene families *Genomic classification of protein-coding gene families
  10 KB (1,279 words) - 18:20, 18 October 2013
• Software Life Cycle: 1. Updating The Development Server
  <td>Load Genomic GFF databases</td> ...c sequence and conceptual translations. In addition, for C. elegans and C. briggsae, we build blast databases for ESTs and "genes" (actually clones).
  25 KB (3,632 words) - 03:11, 28 October 2013
• Virtual Machines
  Bio::DB::GFF - ''Perl API to genomic annotations'' ...es of genomic annotations, including (as of WS170, 2/2007), C. elegans, C. briggsae, and C. remanei. You can use the Bio::DB::GFF API -- part of BioPerl -- to
  11 KB (1,664 words) - 18:43, 17 August 2010
• Journal first-pass (jfp) postgres table details
  ...if data is presented for any species other than ''C. elegans'', e.g., ''C. briggsae'', ''Pristionchus pacificus'', ''Brugia malayi'', etc. || ...names (e.g., sjj_ZK617.1, cenix:155-g4, mv_CAA3346 or the library used), genomic coordinates of the primers (e.g. IV:11970667..12012891, ZK1067:13703..22295
  16 KB (2,310 words) - 11:05, 21 December 2011
• ModENCODE Integration status
  This is a single tiling-array data-set of genomic regions in the 'embryo' life-stage - it looks like a test for a project tha This is a single tiling-array data-set of genomic regions in the 'young adult' life-stage - it looks like a test for a projec
  17 KB (2,478 words) - 14:07, 5 July 2012

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