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• WormBase-Caltech Weekly Calls December 2020
  | Used in human manual GO curation (Protein2GO) * What shows up in autocomplete? What shows up in term info?
  4 KB (572 words) - 17:01, 13 January 2021
• Gene Expression micropublications
  *Subcellular localization -> autocomplete on GO CC Can we see Wobr tree in term info? so users can navigate the tree if they need to
  21 KB (3,194 words) - 02:08, 17 May 2018
• WBConfCall 2018.03.15-Agenda and Minutes
  *Initially thought it would be textual data that would go into disease model curation, but really involves other data types such as V * Will help Alliance project over long term
  3 KB (400 words) - 16:03, 15 March 2018
• OA-phenotype
  ...at calls the module, the module is what generates the data, and we need to go over that if we're going to change stuff -- J''' ok ** Note: field to suggest new phenotype term. Will replace whatever term(s) are currently in the Phenotype field once it is approved
  23 KB (3,334 words) - 19:01, 31 October 2017
• OA forms, tables, scripts, etc
  ...raciti/oa_expr_ace_dumper/use_package.pl ||Paper<br> Gene<br> Anatomy<br> GO<br> Lifestage<br> Type<br> Transgene<br> Antibody<br> Clone<br> Strain<br> ...Gene ontology annotation|| || || || ||Kimberly Van Auken, Ranjana Kishore||GO pipeline is currently in flux as we migrate to using Protein2GO
  20 KB (3,050 words) - 21:01, 19 April 2017
• Unused Attributes
  | :anatomy-term/evidence | :anatomy-term/reference
  35 KB (4,174 words) - 10:52, 2 February 2015
• WBConfCall 2018.06.07-Agenda and Minutes
  [Term] id: GO:0003674
  11 KB (1,898 words) - 16:43, 7 June 2018
• WormBase-Caltech Weekly Calls May 2019
  ...mean the same thing to everyone? Is there a way to assess discrepancies in term definitions among members of the community? * How do we help community curators decide the correct term?
  6 KB (911 words) - 17:13, 6 June 2019
• WormBase-Caltech Weekly Calls May 2015
  * We want some text on WOBr, GO annotation changes, automated descriptions, etc. ** We could display a notice/warning message in the form (or term info) that indicates that a paper entered in the "PubMed" field has already
  8 KB (1,305 words) - 23:24, 3 June 2015
• TAIR CCC
  2) sentences from papers already curated by TAIR for GO Cellular Component 3) sentences from papers not curated by TAIR for GO Cellular Component
  24 KB (3,814 words) - 18:31, 8 August 2011
• WormBase-Caltech Weekly Calls August 2020
  **In the short term we will load the Molecule CV into the Alliance (Ranjana and Michael P. will * Kimberly has occasionally uploaded a species.ace file in the context of GO curation; but Hinxton otherwise handles it; should ask them
  5 KB (880 words) - 15:40, 3 September 2020
• WormBase-Caltech Weekly Calls September 2016
  *Next GO Consortium meeting is in early November at USC ...d describe searching with general text to find matches to genes, diseases, GO terms, and orthology groups
  9 KB (1,490 words) - 15:35, 6 October 2016
• Updating ontology (.obo) files for the OA
  This obo file is used to display term info for variations, transgenes, strains, clones, rearrangements, genes in ...contains a list of terms with accompanying information for display in the term info window. This is in contrast to other flat files that only contain a s
  10 KB (1,644 words) - 18:48, 13 August 2020
• WormBase-Caltech Weekly Calls February 2013
  WS236 will go live on April 5, 2013 *Group phenotypes by e.g. anatomy term, life stage, etc.?
  8 KB (1,161 words) - 16:34, 7 March 2013
• Specifications for a DAF for gene-disease data
  ...OT||Used to indicate that the DB object is not <br/>associated with the DO term/association type||Does not exist||Qualifier||NOT ...0 or 1||NOT||Used to indicate DB object is not <br/>associated with the DO term/association type||Does not exist ||Need to add tag for WS262||WB has starte
  10 KB (1,599 words) - 18:53, 24 January 2019
• WormBase-Caltech Weekly Calls April 2013
  *GO terms *Store MySQL databases on the cloud? Bypass fire walls? Maybe for long term plan
  4 KB (651 words) - 16:11, 2 May 2013
• WormBase-Caltech Weekly Calls July 2015
  * Ontology term enrichment analysis, using ontologies other than gene ontology ** Discussed on GO call yesterday; we can/should follow up with Paul Thomas
  10 KB (1,464 words) - 17:09, 13 August 2015
• WormBase-Caltech Weekly Calls February 2018
  ...y cannot curate to individual cells, but we can annotate to a higher level term === GO curation ===
  12 KB (1,809 words) - 16:33, 1 March 2018
• WormBase-Caltech Weekly Calls August 2018
  *** What should the scope of an ontology term be? Context? Life stage? Conditions? Treatment? *** Being weary of ontology term count explosion; what's the right balance?
  9 KB (1,366 words) - 15:19, 6 September 2018
• Phenote cgi wish list
  1. Term info panel (which displays info on the paper object, allele, ontology term etc.) 15. Auto update date for GO form (must be editable esp. if it's a minor edit)
  7 KB (1,075 words) - 21:05, 24 September 2010

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