Difference between revisions of "Data mining"
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#[[Converting Coordinates between releases|Converting Coordinates between releases]] | #[[Converting Coordinates between releases|Converting Coordinates between releases]] | ||
#[[WormBase Identifiers]] - ''A quick guide to WormBase object identifiers'' | #[[WormBase Identifiers]] - ''A quick guide to WormBase object identifiers'' | ||
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Revision as of 18:35, 11 August 2010
Contents
Data Model
- About the WormBase data model - how data is stored and structured at WormBase
- AceDB classes - A comprehensive list of AceDB classes
- AceDB classes tutorial -Examples and descriptions of commonly accessed classes at WormBase
- GFF2 features - Descriptions of features contained in the WormBase GFF2 genome annotation files
Query Languages
- AQL tutorial - Using the AceDB query language, AQL
- WQL tutorial - Using the WormBase query language, WQL
WormMart
APIs
AcePerl, a Perl interface to AceDB/WormBase
Bio::DB::GFF
- Mining WormBase with Bio::DB::GFF - extract sequence annotations en masse using this Perl module
Miscellaneous
- Linking To WormBase
- Converting Coordinates between releases
- WormBase Identifiers - A quick guide to WormBase object identifiers
