Difference between revisions of "Species available through WormBase (overview)"
From WormBaseWiki
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|[http://www.wormbase.org/db/seq/gbrowse/c_elegans yes] | |[http://www.wormbase.org/db/seq/gbrowse/c_elegans yes] | ||
|[http://www.wormbase.org/db/searches/blast_blat BLAST Search]<br>genes, proteins, ests, genomic | |[http://www.wormbase.org/db/searches/blast_blat BLAST Search]<br>genes, proteins, ests, genomic | ||
− | |[http://www.wormbase.org/db/searches/blast_blat BLAT Search] | + | |[http://www.wormbase.org/db/searches/blast_blat BLAT Search] <br> genomics |
|[http://www.wormbase.org/db/gene/gene?name=WBGene00006763 Gene Summary] | |[http://www.wormbase.org/db/gene/gene?name=WBGene00006763 Gene Summary] | ||
|[http://www.wormbase.org/db/seq/sequence Sequence Summary] | |[http://www.wormbase.org/db/seq/sequence Sequence Summary] |
Revision as of 14:56, 6 January 2010
Species | Genome Browser |
BLAST | BLAT | Genes | Sequences | Proteins | Orthology |
Brugia malayi | yes -missing name data for gene models -gene page available for brigpep, remaneiX, and wormpep protein match features |
BLAST Search genomic, proteins |
|||||
Caenorhabditis elegans | yes | BLAST Search genes, proteins, ests, genomic |
BLAT Search genomics |
Gene Summary | Sequence Summary | Protein Summary | |
Caenorhabditis brenneri | genomic, proteins | ||||||
Caenorhabditis briggsae | Yes - includes nGASP predictions | genes, proteins, ests, genomic | genomic | ||||
Caenorhabditis japonica | yes - includes nGASP predictions |
genomic | Gene Summary | Sequence Summary | Protein Summary | ||
Caenorhabditis remanei | yes - includes nGASP predictions |
genomic, proteins | Gene Summary | Sequence Summary | Protein Summary | ||
Haemonchus contortus | yes | gbrowse_details | |||||
Meloidogyne hapla | yes | genomic | gbrowse_details | ||||
Meloidogyne incognita | |||||||
Pristionchus pacificus | genomic, proteins | ||||||