Difference between revisions of "2016 Advisory Board Meeting"
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== Thu 4th Feb == | == Thu 4th Feb == | ||
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+ | *how we do on curation -beginning | ||
+ | *details on database migration | ||
+ | *plans for next year | ||
+ | *metrics | ||
== Fri 5th Feb == | == Fri 5th Feb == |
Revision as of 18:41, 17 December 2015
The 2016 edition of the WormBase Scientific Advisory Board meeting will take place at Caltech on 4/5 Feb 2016.
Contents
Logistics
Attending
- Hinxton
- Paul Kersey, Matt Berriman, Kevin Howe, Bruce Bolt, Jane Lomax, Michael Paulini, Paul Davis, Gary Williams
- OICR
Accommodation
- Sarah Torres to arrange accommodation for non-locals
Travel
- Hinxton
- Will fly out on the 2/3 of Feb, and return on Sun 7th Feb (cheap flights)
- OICR
Advisors
- Jason Stajich
- Mike Cherry
- Brian Oliver
- Oliver Hobert
- A C. elegans geneticist
- A parasitologist
Project meeting
Scheduling
- All-hands project meeting, or smaller discussion groups?
- Before the SAB meeting or after?
- A pre-meeting would allow us to refine the agenda of the SAB (although perhaps too late for that)
- A post-meeting would allow us to set some goals based on comments/advise from the advisors
- Hinxton folks have more time after the meeting
Discussion topics
- Cross-site unification of documentation and code; what are our standards for documentation? For code?
- Organisation, display and querying of RNASeq data (c.f. FlyBase)
- Database migration
- What is the plan and timeline for incorporating the new database in the build? In curation workflows?
- WormBase / ParaSite integration + cross-resource tools (e.g. enrichment tool)
- Efficiency improvements
- Community curation (allele-phenotype, concise descriptions, etc.)
- Text mining
- SObA (Solr/Amigo/Cytoscape reuse)
- Automated concise descriptions
- Micropublications
- Human disease / pathways
- Genomics
Agenda (preliminary)
Thu 4th Feb
- how we do on curation -beginning
- details on database migration
- plans for next year
- metrics