Difference between revisions of "BioGRID ftp file to WormBase Model"
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− | Chris Stark made a file available with | + | Chris Stark made a file available with BioGRID worm curation that has the following columns: |
Systematic A (e.g. AC7.2) | Systematic A (e.g. AC7.2) |
Revision as of 20:58, 13 June 2011
Chris Stark made a file available with BioGRID worm curation that has the following columns:
Systematic A (e.g. AC7.2)
Systematic B
BioGRID ID A
BioGRID ID B
Wormbase ID A (e.g. WBGene00004929)
Wormbase ID B
Experimental System
Experimental System Type (physical or genetic)
Author
Pubmed
Organism Interactor A
Organism Interactor B
Quantitative Score (hyphen if no score)
Modification
Throughput (high throughput or low throughput)
Qualification (pipe-delimited)
Phenotype (pipe-delimited phenotype:phenotype type)
The Biogrid IDs are included in case WB wants to make links back to Biogrid using the format:
http://thebiogrid.org/42412
This file will be posted at the following url on a monthly basis: http://www.thebiogrid.org/downloads/datasets/WORMBASE.tab.txt