Difference between revisions of "WBConfCall 2023.08.03-Agenda and Minutes"
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= Help Desk = | = Help Desk = | ||
== Open tickets == | == Open tickets == | ||
| − | * [https://github.com/WormBase/website/issues/9291 genetics tab on WormBase freezing.] - Discuss | + | * [https://github.com/WormBase/website/issues/9291 genetics tab on WormBase freezing.] - Discuss; Stavros will try to contact Don Moerman directly for confirmation |
* [https://github.com/WormBase/website/issues/9290 Hi, My contact emails on Wormbase are...] - Where is this user seeing the out-of-date information? | * [https://github.com/WormBase/website/issues/9290 Hi, My contact emails on Wormbase are...] - Where is this user seeing the out-of-date information? | ||
* [https://github.com/WormBase/website/issues/9289 Hello, I want to find a promoter sequ...] - Closed - thank you, Stavros! | * [https://github.com/WormBase/website/issues/9289 Hello, I want to find a promoter sequ...] - Closed - thank you, Stavros! | ||
* [https://github.com/WormBase/website/issues/9288 Hi, I'm querying Wormbase via the Swa...] - Closed - thanks, Todd! | * [https://github.com/WormBase/website/issues/9288 Hi, I'm querying Wormbase via the Swa...] - Closed - thanks, Todd! | ||
| − | * [https://github.com/WormBase/website/issues/9282 New external links for connectome display] - Raymond, can you confirm all is working as expected? | + | * [https://github.com/WormBase/website/issues/9282 New external links for connectome display] - Raymond, can you confirm all is working as expected? Yes. They are working now. |
| − | Yes. They are working now. | ||
* [https://github.com/WormBase/website/issues/9281 Server Error: 500 at rest/widget/all/static-widg...] - Paolo, Todd - can this be closed? | * [https://github.com/WormBase/website/issues/9281 Server Error: 500 at rest/widget/all/static-widg...] - Paolo, Todd - can this be closed? | ||
= WS290 Build = | = WS290 Build = | ||
* Any issues that have come up and need to be discussed? | * Any issues that have come up and need to be discussed? | ||
| + | * To be started early next week - delays due to curation work between builds | ||
| − | [Karen] How do I deal with non-elegans gene names that are used in genetics and microPublication articles. Do we assign public-names. eg Ctr-dpy-10, Cni-dpy-18?<br> do we assign public names to other species? Should I tell the authors to not use them? | + | = Non-elegans gene names = |
| + | * [Karen] How do I deal with non-elegans gene names that are used in genetics and microPublication articles. Do we assign public-names. eg Ctr-dpy-10, Cni-dpy-18?<br> do we assign public names to other species? Should I tell the authors to not use them? | ||
| + | * Will wait for Tim S. to weigh in | ||
| + | * May need a systematic way to handle genes for which the C. elegans genes still just have a sequence name | ||
| + | = Nematode images for ENSEMBL = | ||
| + | * Ask the resesrchers | ||
| + | * Bhagwati Gupta briggsae | ||
| + | * Eric Haag (already sent one for C. remanei) | ||
| + | * Ron Ellis | ||
| + | * Try literature searches - https://celegans.textpressocentral.org/tpc/search | ||
| − | On call: Andres, Dio, Jae, Juancarlos, Karen, Kimberly, Michael, Paolo, Ranjana, Raymond, Scott, Stavros, Steph, Todd, Valerio | + | On call: Andres, Dio, Jae, Juancarlos, Karen, Kimberly, Mark, Michael, Paolo, Ranjana, Raymond, Scott, Stavros, Steph, Todd, Valerio |
Latest revision as of 15:52, 3 August 2023
Contents
Help Desk
Open tickets
- genetics tab on WormBase freezing. - Discuss; Stavros will try to contact Don Moerman directly for confirmation
- Hi, My contact emails on Wormbase are... - Where is this user seeing the out-of-date information?
- Hello, I want to find a promoter sequ... - Closed - thank you, Stavros!
- Hi, I'm querying Wormbase via the Swa... - Closed - thanks, Todd!
- New external links for connectome display - Raymond, can you confirm all is working as expected? Yes. They are working now.
- Server Error: 500 at rest/widget/all/static-widg... - Paolo, Todd - can this be closed?
WS290 Build
- Any issues that have come up and need to be discussed?
- To be started early next week - delays due to curation work between builds
Non-elegans gene names
- [Karen] How do I deal with non-elegans gene names that are used in genetics and microPublication articles. Do we assign public-names. eg Ctr-dpy-10, Cni-dpy-18?
do we assign public names to other species? Should I tell the authors to not use them? - Will wait for Tim S. to weigh in
- May need a systematic way to handle genes for which the C. elegans genes still just have a sequence name
Nematode images for ENSEMBL
- Ask the resesrchers
- Bhagwati Gupta briggsae
- Eric Haag (already sent one for C. remanei)
- Ron Ellis
- Try literature searches - https://celegans.textpressocentral.org/tpc/search
On call: Andres, Dio, Jae, Juancarlos, Karen, Kimberly, Mark, Michael, Paolo, Ranjana, Raymond, Scott, Stavros, Steph, Todd, Valerio
