Difference between revisions of "2018 Advisory Board Meeting"
(→Agenda) |
|||
Line 13: | Line 13: | ||
* OICR | * OICR | ||
** Lincoln Stein, Todd Harris, Adam Wright, Paulo Nuin, Sibyl Gao | ** Lincoln Stein, Todd Harris, Adam Wright, Paulo Nuin, Sibyl Gao | ||
+ | |||
+ | = Presentation slides, drafts, etc = | ||
+ | ** https://drive.google.com/drive/folders/161gEkCTxIAy22iVm1gRWmhYu_yhavMf6 | ||
+ | ** Login with WormBase account to edit. | ||
= Project meeting = | = Project meeting = |
Revision as of 18:16, 21 June 2018
The 2018 edition of the WormBase project meeting / Scientific Advisory Board meeting will take place at OICR on 12/13 July 2018.
Contents
Logistics
Attending
- Hinxton
- Matt Berriman, Kevin Howe, Michael Paulini, Paul Davis, Gary Williams, Matt Russell, Faye Rodgers
- Caltech
- Chris Grove, Kimberly Van Auken, Raymond Lee, Karen Yook, Paul Sternberg, Wen Chen, April Jauhal, Ranjana Kishore, Juancarlos Chan
- OICR
- Lincoln Stein, Todd Harris, Adam Wright, Paulo Nuin, Sibyl Gao
Presentation slides, drafts, etc
- https://drive.google.com/drive/folders/161gEkCTxIAy22iVm1gRWmhYu_yhavMf6
- Login with WormBase account to edit.
Project meeting
Agenda
Short talks from Everyone --5 minutes pe peson with 5 mintues discussion 10 x 24 = 4 hours
It would be a good idea if wrote down below the general theme of what we will each be talking about, so that we can group the talks into themes. This might fall-out as per-site groupings, but some things (e.g. back-end migration) are cross-site and would benefit from being grouped together.
- Kevin Howe
- Michael Paulini - parasitic core species
- Paul Davis - CGC, Variants and Strains
- Gary Williams
- Matt Russell
- Faye Rodgers
- Chris Grove - phenotype curation & community phenotype curation, interactions (genetic & physical)
- Kimberly Van Auken - gene function annotation using GO
- Raymond Lee
- Karen Yook ??making more use of microPublication??
- Wen Chen
- April Jauhal -- gene regulation interactions
- Ranjana Kishore - Automated gene descriptions and disease models
- Juancarlos Chan
• Paul Sternberg Transcriptional Regulation, what we need to do
- Todd Harris -- website status; use and users; associated costs and management; third party projects we support
- Adam Wright
- Paulo Nuin
- Sibyl Gao
topics Backend: datomic migration, curation, Alliance plans
WormMine etc.
Thursday dinner for staff and SAB member
Evening, Thursday July 12
SAB
Advisors
attending
- Valerie Wood - PomBase
- Mary Shimoyama - RGD
- Ann Rougvie
- Brian Oliver
- Gary Bader
- Brent Derry
- Mei Zhen
regrets
- Oliver Hobert
- Julie Ahringer
- Andrew Chisholm
- Mike Cherry
- John Calarco
Agenda
0800 coffee???
0830 introduction and overview -Paul Sternberg
Overview of Project, Funding, The Alliance, Big Picture, Issues, Outreach,
0900 dataflow and backend: status and plans -Kevin Howe
Status
0945 curation: status and plans -Chris Grove
Prioritization of datatypes How this is impacted by Alliance
1030 break
1100 website: status and plans - Todd Harris
DevOps Tools Running on datomic
1130 tools and displays;status and plans
WormMine - Ontology Browsing -Raymond ParaSite - Kevin Howe
1200 lunch
1300 SAB discussion
1430 Feedback, and Discussion
1630 conclude
Dinner for those who are not departing immediately
Evening, Friday, July 13