Source and maintenance of non-WBGene info

AceDB tag	Postgres table	Current - Nameserver nightly dump	Current - WS bimonthly release	Future - Geneace nightly dump	Future - WS bimonthly release	Use - Paper or meeting abstract gene connection	Use - OA data type curation	Use - OA term info	Use - Dumping scripts	Use -Text mining/SVM	Use - Updating GSA Lexicon	Comment
Variation	obo_name_variation obo_data_variation	yes	yes	yes	no	no	yes	yes	yes	no	no	WBVariationID
Variation public_name	obo_name_variation obo_data_variation	no	yes	yes	no	no	yes	yes	no	For Mary Ann's Variation first pass/SVM	For Variation lexicon	In multiple OAs
Variation- Gene	obo_data_variation	no	yes	yes	no	no	no	yes Display WBGeneID and gin_locus	no	no	no
Variation -Reference	obo_data_variation	no	yes	yes	no	no	no	yes	no	yes? for MA's scripts??	no
Variation -Method	obo_data_variation	no	no used to query for Variation type Allele and Transposon	yes	no	no	no	yes	no	no	no	Only take in data from Variation objects with these Methods: "Allele" "Deletion_allele" "Deletion_and_insertion_allele" "Deletion_polymorphism "Insertion_allele" "Insertion_polymorhism" "KO_consortium_allele" "Mos_insertion" "NBP_knockout_allele" "NemaGENETAG_consortium_allele" "Substitution_allele" "Transposon_insertion"
Status	obo_data_variation	yes	yes	yes	no	no	no	yes	no	no	no
Rearrangement	obo_name_rearrangement obo_data_rearrangement	no	yes	yes	no	no	yes	yes	no	no	yes
Rearrangement -map	obo_data_rearrangement	no	yes	yes	no	no	no	yes	no	no	no
gene_inside	obo_data_rearrangement	no	yes	yes	no	no	no	yes display gin_locus (do not need WBGeneID)	no	no	no
gene_outside	obo_data_rearrangement	no	yes	yes	no	no	no	yes display gin_locus (do not need WBGeneID)	no	no	no
Strain	obo_name_strain obo_data_strain	no	yes	yes	no	no	yes	yes	no	no	yes
Strain -genotype	obo_data_strain	no	yes	yes	no	no	no	yes	no	no	no
Strain- location	obo_data_strain	no	yes	yes	no	no	no	yes	no	no	no
Clone	obo_name_clone obo_data_clone	no	yes	yes	no	no	yes (expr_pattern)	yes	no?	no	yes
Clone -Type	Not sure you need a table for this. All clones that populate the clone tables will be of one type = PLASMID	no	yes	yes	no	no	no	yes	no	no	no
Clone -Transgene	obo_data_clone	no	yes	yes	no	no	no	yes	no	no	no	I don't think there is any data in this tag in the ftp cloness.ace
Clone -strain	obo_data_clone	no	yes	yes	no	no	no	yes	no	no	no
Clone -general_remark	obo_data_clone	no	yes	yes	no	no	no	yes	no	no	no
Clone -location	obo_data_clone	no	yes	yes	no	no	no	yes	no	no	no
Clone -accession_number	obo_data_clone	no	yes	yes	no	no	no	yes	no	no	no
Laboratory	obo_name_laboratory obo_data_laboratory	no	yes	yes	no	no	yes	yes	no	no	no
Laboratory -Representative	obo_name_laboratory obo_data_laboratory	no	yes	yes	no	no	yes	yes	no	no	no
Laboratory -Registered_lab_members	obo_data_laboratory - actually I don't know if this needs to be displayed in the term info	no	yes	yes	no	no	no	yes	no	no	no
Laboratory - allele_designation	obo_data_laboratory	no	yes	yes	no	no	no	yes	no	yes MA's script	yes? use for text markup regex?
Laboratory - strain_designation	obo_data_laboratory	no	yes	yes	no	no	no	yes	no	no	no
Laboratory -Mail	obo_data_laboratory	no	yes	yes	no	no	no	yes	no	no	no