Difference between revisions of "Movie"
From WormBaseWiki
Jump to navigationJump to search (→OA) |
(→OA) |
||
Line 26: | Line 26: | ||
* Description -> "mov_description" bigtext | * Description -> "mov_description" bigtext | ||
* RNAi -> "mov_rnai" Text | * RNAi -> "mov_rnai" Text | ||
− | There 500 objects we currently have for movie/rnai are not in rnai OA but are stored in citace minus so we cannot import them as multiontology. | + | There are 500 objects we currently have for movie/rnai are not in rnai OA but are stored in citace minus so we cannot import them as multiontology. |
* Expression pattern -> "mov_exprpattern" multiontology on expression patterns as in Picture OA | * Expression pattern -> "mov_exprpattern" multiontology on expression patterns as in Picture OA | ||
* Variation -> "mov_variation" multiontology on variations like in phenotype OA tab1 | * Variation -> "mov_variation" multiontology on variations like in phenotype OA tab1 | ||
* Remark -> "mov_remark" text | * Remark -> "mov_remark" text | ||
* Curator -> "mov_curator" | * Curator -> "mov_curator" |
Revision as of 01:44, 16 October 2012
Movie Curation
In October 2012 we have decided to generate a movie OA. There were 514 movies in acedb, all pertaining the RNAi class. We are going to generate the movie OA and import those objects. Files on tazendra /home/acedb/draciti/Movies
Movie Data Model
////////////////////////////////////////////////////////////////////////////////////
?Movie Description ?Text Name UNIQUE Text Pick_me_to_call Text Text RNAi ?RNAi XREF Movie Variation ?Variation XREF Movie Expr_pattern ?Expr_pattern XREF Movie Remark ?Text #Evidence
///////////////////////////////////////////////////////////////////////////////////
OA
- Pgdbid -- no table -- postgres database ID, generates automatically upon entry.
- WBMovie -> "mov_name" Generates automatically upon entry. WBMovie0000000001
- Source -> "mov_source" text
- Description -> "mov_description" bigtext
- RNAi -> "mov_rnai" Text
There are 500 objects we currently have for movie/rnai are not in rnai OA but are stored in citace minus so we cannot import them as multiontology.
- Expression pattern -> "mov_exprpattern" multiontology on expression patterns as in Picture OA
- Variation -> "mov_variation" multiontology on variations like in phenotype OA tab1
- Remark -> "mov_remark" text
- Curator -> "mov_curator"