View source for WBConfcall 2023.07.20–Agenda and Minutes

==Regrets== 
 

==Agenda==
Alliance grant due in two months. <br>

Cherry starting to retire, moving things to other people. <br>
Should AWS be done out of Stanford or OICR, what is the difference in baseline costs + overhead. OICR does not have any discounts. <br>
NIH STRIDES program (cloud computing best practices)- will give a small % discount<br>

Todd proposes best to have everything together, rather than distributed with different infrastructure and silos of the different pieces


====JBrowse search by coordinates ====
Raymond brings up difficulty in using coordinates to search and retrieve sequence within those coordinates - simple sequence
We used to have a BioDBGFF that allowed one to do that<br>
PNuin - searching by coordinates in WormMine will only return the gene within the coordinates searched, not surrounding area<br>
Scott proposes to write something that would return all the sequence of coordinate search, will check around to see if something already exists.<br>
Raymond sees that WormMine has the capability, but returns a more detailed return based on annotations, PNuin with look into the tool and see if it can be set to return just sequence. <br>

ParaSite BioMart may do this. <br>
Paul - people want simple returns.

==HelpDesk==




Next Help Desk Officer Wen, 2023-07-24