WebDev 2013.03.27-Agenda and Minutes

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Minutes

Todd

Admin

  • begin taking minutes again

communications

  • email TH if you think the site is down

deployment

  • webhook - is it working?
  • non-privileged user runs starman
  • occasionally fails during git pull

Abby

WS236

  • data display issues done for WS236 - merged to master
  • search - taking up memory with synonym


JD

Ace vs GFF3

  • which is more reliable?
  • species dependent - TH
  • TH - there are species with GFF3 only, nothing in ace
  • JD - loading gene model data from ace, might not ever use gff3...
  • TH - There are going to be fields you never use in ace since the data is in GFF3.
  • JD - build time
    • filtering Protein - remove all mas spec proteins and small species
    • 9.1G -> 7.2G
    • running test build now
  • Writing xpath for Variation
  • data loading issue right now for website
  • start going through js issues
  • moving datafiles to /nfs -> will complicate git repo
  • TH: will add memory to intermine server

TH


  • change our wednesday call -> Friday
    • redundant on wed since we talk on monday
    • 11am every Fri -> starting next week