WebDev 2010.06.02-Agenda and Minutes

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Agenda

1. Administrative update (Todd; 5 minutes)

  • Migration
    • new biomart server
    • access log analysis
    • ftp server
    • mailing lists (pending)
  • VM issue in D state; i/o or sockets
  • Pending A name updates: ftp, biomart
  • ftp pending oicr approval
  • mysql firewall exception pending approval
  • proxy issues

2. GBrowse status / testing (Todd and Xiaoqi; 5 minutes)

  • upgraded in production running 2.08

4. modENCODE status update (Xiaoqi; 10 minutes)

  • included Henikoff and Lieb data XS
  • server function looks good
  • consolidation of data (time series and xcription factors, etc) into subtracts for 3.09, (LS)

5. WS214 and WS215 update status (Norie; 10 minutes)

  • WS214 done last week
  • Dev on WS215, mostly all tested and running fine, some data in flux for further development

6. API development progress (Xiaoqi, Norie, Todd; 10 minutes)

 http://dev.wormbase.org:9091/reports/protein/WP:CE28239
  • NBC: Done with Gene Ontology; Move forward on Person

7. Open Table

  • NBC - gone through 06/09.