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  • ==C. elegans as a model system to study disease and disease genes== ...g of new ones, based on the published literature, where elegans is used to model the biology of a disease and/or the orthologous elegans gene function is st
    5 KB (782 words) - 20:56, 8 January 2020
  • The WS126 release of WormBase last month featured a complete genome with no gaps remaining in the genome == WormBase launches the 'WormBook' project ==
    4 KB (621 words) - 15:38, 24 September 2007
  • ...nants worldwide also known as red stomach worm, wire worm or Barber's pole worm, is very common parasite and one the most pathogenic nematodes of ruminants ...ving model nematode ''Caenorhabditis elegans''. This makes it an important model of parasitic nematode biology that is commonly used for experimental studie
    3 KB (493 words) - 16:03, 15 December 2011
  • == Adding worm disease models/data to the Monarch Initiative website== *http://monarchinitiative.org/ : connects phenotypes, diseases, models, and genes for translational research across species (People involved: Melissa Haendel
    5 KB (807 words) - 18:27, 4 September 2014
  • https://github.com/WormBase/website/issues/5092 * Discussion on making available on WormBase the chapters we wrote for the WormBook.
    2 KB (369 words) - 16:38, 6 October 2016
  • * File in /usr/local/wormbase/databases/{RELEASE}/orthology and automatically generated by orthology data * mark the elegans/worm genes with omim ortholgs, as caltech is unable to query into the proteins (done b
    4 KB (583 words) - 20:22, 29 July 2011
  • New release of WormBase WS185, Wormpep185 and Wormrna185 Fri Nov 30 17:11:38 GMT 2007 vii) confirmed_genes.WS185.gz - DNA sequences of all genes confirmed by EST &/or cDNA
    6 KB (680 words) - 07:37, 11 January 2008
  • ...cial wiki site for [http://www.wormbase.org WormBase], the database of the model organism [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditi WormBase is developed by an [http://www.wormbase.org/about/staff#01--10 international consortium] of researchers and compute
    4 KB (507 words) - 08:46, 8 October 2014
  • New release of WormBase WS183, Wormpep183 and Wormrna183 Tue Oct 16 16:18:34 BST 2007 vii) confirmed_genes.WS183.gz - DNA sequences of all genes confirmed by EST &/or cDNA
    7 KB (800 words) - 10:01, 8 November 2007
  • New release of WormBase WS186, Wormpep186 and Wormrna186 Fri Dec 21 08:57:59 GMT 2007 vii) confirmed_genes.WS186.gz - DNA sequences of all genes confirmed by EST &/or cDNA
    6 KB (683 words) - 05:51, 3 April 2008
  • As the modENCODE DCC is overwhelmed with other work, she has proposed that WormBase make the data available to the public. Our position with providing primary data to users has always been that WormBase isn't a primary repository of data.
    5 KB (796 words) - 21:05, 10 March 2014
  • [[WS241_Models.wrm | WS241 model details]] *These annotations need to be properly credited, so for the new GO annotation model we would like to create WBPerson objects for these groups and use Curator_c
    8 KB (1,246 words) - 15:52, 12 November 2013
  • =WormBase Curated Data Types and Curation Methods= HMM - Hidden Markov Model
    9 KB (1,174 words) - 18:30, 29 August 2012
  • ...current production release ONTOLOGY directory: ftp://ftp.wormbase.org/pub/wormbase/releases/current-production-release/ONTOLOGY/ ...e suggestion for the Alliance is to create a description based on a GO-CAM model
    6 KB (861 words) - 19:23, 5 November 2020
  • * WB needs Genes from nameserver, which is on AWS, so need creds or AMI ? **** java -cp wb-names-export.jar clojure.main -m wormbase.names.export gene genes.csv
    7 KB (1,113 words) - 18:19, 6 April 2023
  • ew release of WormBase WS184, Wormpep184 and Wormrna184 Thu Nov 8 12:09:34 GMT 2007 vii) confirmed_genes.WS184.gz - DNA sequences of all genes confirmed by EST &/or cDNA
    7 KB (831 words) - 07:36, 11 January 2008
  • ==== Unified Interaction model - Chris & Kimberly ==== * PaulD: The model is OK but is the web capable of displaying it?
    5 KB (800 words) - 10:09, 17 February 2012
  • *When mark a paper, separate into two different types of genes :stable vs unstable **Stable genes map to stable ID
    4 KB (612 words) - 17:13, 1 December 2011
  • *WormBase - Bitbucket, GitHub (can commit code) *Is WormBase interested connecting to it?
    7 KB (1,117 words) - 16:39, 4 August 2011
  • **How to get GO terms for a list of genes? International Worm Meeting
    6 KB (864 words) - 15:32, 6 June 2013

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