Difference between revisions of "WormBase-Caltech Weekly Calls"

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[[WormBase-Caltech_Weekly_Calls_May_2019|May]]
 
[[WormBase-Caltech_Weekly_Calls_May_2019|May]]
  
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[[WormBase-Caltech_Weekly_Calls_June_2019|June]]
  
== June 6, 2019 ==
 
  
=== New SObA graphs ===
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== July 11th, 2019 ==
* May put graphs within existing widgets, but don't need to rush to get that ready for IWM
 
  
=== Phenotype association file format ===
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=== Alliance all hands meeting ===
* May be best to leave the format as is
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* Raymond: would be interested in discussing ontologies and their usage in the Alliance
* There are problems; paper IDs keep switching columns
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** Phenotype, anatomy ontologies, GO, etc.
* Would need to revisit the reasoning for why we do it that way
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** Ontology browsers, SObA
* When will the Alliance produce a similar/replacement file? Not sure
 
  
=== Phenotype requests ===
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=== IWM workshop ===
* Sent out 1140 emails on May 30
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* Videos ready for upload
* Since have received 374 annotations from 54 papers (42 requested, 12 additional)
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* Wen and Raymond now have access to outreach@wormbase.org account; will upload videos
* 21 papers flagged as not having phenotypes
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* Of 1140 papers emailed about, 35 emails bounced, and have received some flagging or curation on 63 (63/1105 = ~6% response rate), in first week
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=== Protocol videos ===
 +
* Wen met Craig Mello at the IWM; he is interested in putting up microinjection videos online; linkable from WormBase?
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* Can make each video a Video Weblog so people can make comments, etc.

Revision as of 14:01, 15 July 2019

Previous Years

2009 Meetings

2011 Meetings

2012 Meetings

2013 Meetings

2014 Meetings

2015 Meetings

2016 Meetings

2017 Meetings

2018 Meetings


GoToMeeting link: https://www.gotomeet.me/wormbase1


2019 Meetings

January

February

March

April

May

June


July 11th, 2019

Alliance all hands meeting

  • Raymond: would be interested in discussing ontologies and their usage in the Alliance
    • Phenotype, anatomy ontologies, GO, etc.
    • Ontology browsers, SObA

IWM workshop

  • Videos ready for upload
  • Wen and Raymond now have access to outreach@wormbase.org account; will upload videos

Protocol videos

  • Wen met Craig Mello at the IWM; he is interested in putting up microinjection videos online; linkable from WormBase?
  • Can make each video a Video Weblog so people can make comments, etc.