Difference between revisions of "WormBase-Caltech Weekly Calls"

From WormBaseWiki
Jump to: navigation, search
m (June 13, 2019)
m
 
(38 intermediate revisions by 3 users not shown)
Line 35: Line 35:
 
[[WormBase-Caltech_Weekly_Calls_May_2019|May]]
 
[[WormBase-Caltech_Weekly_Calls_May_2019|May]]
  
 +
[[WormBase-Caltech_Weekly_Calls_June_2019|June]]
  
== June 6, 2019 ==
 
  
=== New SObA graphs ===
+
== July 11th, 2019 ==
* May put graphs within existing widgets, but don't need to rush to get that ready for IWM
+
  
=== Phenotype association file format ===
+
=== Alliance all hands meeting ===
* May be best to leave the format as is
+
* Raymond: would be interested in discussing ontologies and their usage in the Alliance
* There are problems; paper IDs keep switching columns
+
** Phenotype, anatomy ontologies, GO, etc.
* Would need to revisit the reasoning for why we do it that way
+
** Ontology browsers, SObA
* When will the Alliance produce a similar/replacement file? Not sure
+
  
=== Phenotype requests ===
+
=== IWM workshop ===
* Sent out 1140 emails on May 30
+
* Videos ready for upload
* Since have received 374 annotations from 54 papers (42 requested, 12 additional)
+
* Wen and Raymond now have access to outreach@wormbase.org account; will upload videos
* 21 papers flagged as not having phenotypes
+
* Of 1140 papers emailed about, 35 emails bounced, and have received some flagging or curation on 63 (63/1105 = ~6% response rate), in first week
+
  
 
+
=== Protocol videos ===
== June 13, 2019 ==
+
* Wen met Craig Mello at the IWM; he is interested in putting up microinjection videos online; linkable from WormBase?
 
+
* Can make each video a Video Weblog so people can make comments, etc.
=== IWM ===
+
* Coordinating transportation of swag boxes to Pauley Pavilion
+
* Workshop on Saturday June 22, from 1pm to 2:30pm
+
* Saturday morning micropublication breakfast 7:30 - 8:30am
+
* Workshop
+
** Presenters: it may be best to present as use cases rather than a research project
+

Latest revision as of 14:01, 15 July 2019

Previous Years

2009 Meetings

2011 Meetings

2012 Meetings

2013 Meetings

2014 Meetings

2015 Meetings

2016 Meetings

2017 Meetings

2018 Meetings


GoToMeeting link: https://www.gotomeet.me/wormbase1


2019 Meetings

January

February

March

April

May

June


July 11th, 2019

Alliance all hands meeting

  • Raymond: would be interested in discussing ontologies and their usage in the Alliance
    • Phenotype, anatomy ontologies, GO, etc.
    • Ontology browsers, SObA

IWM workshop

  • Videos ready for upload
  • Wen and Raymond now have access to outreach@wormbase.org account; will upload videos

Protocol videos

  • Wen met Craig Mello at the IWM; he is interested in putting up microinjection videos online; linkable from WormBase?
  • Can make each video a Video Weblog so people can make comments, etc.