Difference between revisions of "Main Page"
From WormBaseWiki
Jump to navigationJump to searchm |
|||
| Line 2: | Line 2: | ||
To edit this Wiki, please create an account (click on the 'log in/create account' link at the top of the page). Before contributing, please see the [[Wiki objectives and usage guidelines|WormBaseWiki usage guidelines]]. | To edit this Wiki, please create an account (click on the 'log in/create account' link at the top of the page). Before contributing, please see the [[Wiki objectives and usage guidelines|WormBaseWiki usage guidelines]]. | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Using WormBase == | == Using WormBase == | ||
| Line 51: | Line 21: | ||
*[[Citing and Acknowledging WormBase|Citing and Acknowledging WormBase]] | *[[Citing and Acknowledging WormBase|Citing and Acknowledging WormBase]] | ||
*[[Publications|Publications]] - ''public information presented by the developers of WormBase'' | *[[Publications|Publications]] - ''public information presented by the developers of WormBase'' | ||
| − | *[[Local installation of WormBase| | + | *[[Local installation of WormBase|Installing WormBase on your own computer]] |
*[[Editorial policy|Editorial policy]] - ''WormBase editorial policy'' | *[[Editorial policy|Editorial policy]] - ''WormBase editorial policy'' | ||
*[[Acceptable use policy|Acceptable use policy]] | *[[Acceptable use policy|Acceptable use policy]] | ||
*[[WormBaseWiki:Copyrights|Copyright statement]] | *[[WormBaseWiki:Copyrights|Copyright statement]] | ||
*[[Acceptable use policy#Privacy statement|Privacy statement]] | *[[Acceptable use policy#Privacy statement|Privacy statement]] | ||
| + | |||
| + | |||
| + | |||
| + | == Community Resources == | ||
| + | *[[WormBase_Genomes| Overview of species' genomes available in WormBase]] | ||
| + | *[http://www.wormbase.org/db/misc/laboratory?name=%2A;class=laboratory C. elegans laboratories] | ||
| + | *[[Meetings|Meetings]] | ||
| + | *[http://www.wormbase.org/forums/ Worm Community Discussion Forum] ([http://forums.wormbase.org/index.php?board=1.0 Job postings]) | ||
| + | *[[Software for nematode research|Software for nematode research]] | ||
| + | |||
| + | *[[NGASP|NGASP]] | ||
| + | |||
| + | === Reagents and Protocols === | ||
| + | |||
| + | *[[Strains|Strains]] | ||
| + | *[[Reagents|Reagents]] - ''Useful reagents from third-party sources'' | ||
| + | *[[Cosmids/YACs|Cosmids/YACs]] | ||
| + | *[[Fosmids|Fosmids]] | ||
| + | * Experimental protocols: | ||
| + | **[http://www.wormbook.org/toc_wormmethods.html WormMethods @ WormBook] | ||
| + | **[http://forums.wormbase.org/index.php?board=22.0/ Worm Community Forum] | ||
| + | |||
| + | === Web Resources === | ||
| + | *[[Related web resources|Related web resources]] | ||
| + | * Microarray Data Sites | ||
| + | **[http://smd.stanford.edu/search.shtml Stanford Microarray Database (SMD) search page] | ||
| + | **[http://smd.stanford.edu/cgi-bin/search/nameSearch.pl SMD gene-centric search page] | ||
| + | **[http://smd.stanford.edu/cgi-bin/publication/viewPublication.pl?pub_no=91 Jiang et al. (2001), PNAS 98, 218-223] (SMD data from Kim laboratory's 2001 microarray paper) | ||
| + | **[ftp://smd-ftp.stanford.edu/smd/publications/91/ SMD's FTP site] | ||
| + | **[[SPELL|''SPELL'']] | ||
| + | |||
| + | |||
== Staying up-to-date == | == Staying up-to-date == | ||
Revision as of 00:54, 19 November 2011
This is the official wiki site for WormBase, the database of the model organism Caenorhabditis elegans and related nematodes. WormBase is developed by an international consortium of researchers and computer scientists.
To edit this Wiki, please create an account (click on the 'log in/create account' link at the top of the page). Before contributing, please see the WormBaseWiki usage guidelines.
Contents
Using WormBase
User Guides
- Official User Guide -- Usage, FAQs, Glossary of terms
- Data mining - Learn about the methods for mining WormBase systematically
- Searching WormBase for Information About C. elegans (Wiley)
- Downloads - Download commonly requested files and datasets
- Submitting data and reporting errors
General Information
- Release Schedule - When to expect the next release of WormBase, and information on past releases
- Citing and Acknowledging WormBase
- Publications - public information presented by the developers of WormBase
- Installing WormBase on your own computer
- Editorial policy - WormBase editorial policy
- Acceptable use policy
- Copyright statement
- Privacy statement
Community Resources
- Overview of species' genomes available in WormBase
- C. elegans laboratories
- Meetings
- Worm Community Discussion Forum (Job postings)
- Software for nematode research
Reagents and Protocols
- Strains
- Reagents - Useful reagents from third-party sources
- Cosmids/YACs
- Fosmids
- Experimental protocols:
Web Resources
- Related web resources
- Microarray Data Sites
- Stanford Microarray Database (SMD) search page
- SMD gene-centric search page
- Jiang et al. (2001), PNAS 98, 218-223 (SMD data from Kim laboratory's 2001 microarray paper)
- SMD's FTP site
- SPELL
Staying up-to-date
WormBase offers a number of ways to stay up-to-date with new features and datasets, to make feature requests, and to ask for assistance with the database.
- Live Help Desk: The WormBase Room on FriendFeed
- Twitter: Status updates, Software commit messages
- Mailing Lists: General questions | Developers -- More...
- RSS Feeds: News and Status | Development News -- More Info
- WormBase Newsletters
- WormBook Announcements - low volume
- Help Desk During International Worm Meeting
Internal Documentation
- WormBase Staff Resources -- A guide to the tools available for WormBase staff
