Data mining
From WormBaseWiki
Revision as of 02:31, 24 September 2007 by Tharris (talk | contribs) (New page: == Data Model == # About the WormBase data model - ''how data is stored and structured at WormBase'' # AceDB classes - ''A comprehensiv...)
Contents
Data Model
- About the WormBase data model - how data is stored and structured at WormBase
- AceDB classes - A comprehensive list of AceDB classes
- AceDB classes tutorial -Examples and descriptions of commonly accessed classes at WormBase
- GFF2 features - Descriptions of features contained in the WormBase GFF2 genome annotation files
Query Languages
- AQL tutorial - Using the AceDB query language, AQL
- WQL tutorial - Using the WormBase query language, WQL
WormMart
APIs
AcePerl, a Perl interface to AceDB/WormBase
Bio::DB::GFF
- Mining WormBase with Bio::DB::GFF - extract sequence annotations en masse using this Perl module