WormBase Model:GO term

From WormBaseWiki
Jump to: navigation, search

WormBase Models

Curator Comments/Description

Model

////////////////////////////////////////////////////////
//
// ?GO_term class modified 19/09/01 dl
// 
///////////////////////////////////////////////////////

?GO_term Name ?Text
         Definition ?Text
         Term ?Text
         Type UNIQUE Biological_process
                     Cellular_component
                     Molecular_function
         Child Instance ?GO_term XREF Instance_of
               Component ?GO_term XREF Component_of
         Parent Instance_of ?GO_term XREF Instance
                Component_of ?GO_term XREF Component
         Attributes_of Cell       ?Cell       XREF GO_term
                       Motif      ?Motif      XREF GO_term
                       Gene       ?Gene       XREF GO_term // will this replace CDS? [040203 krb]
                       CDS        ?CDS        XREF GO_term
                       Sequence   ?Sequence   XREF GO_term // Erich, [011210 krb]
                       Transcript ?Transcript XREF GO_term // [030411 krb]
                       Pseudogene ?Pseudogene XREF GO_term // [030801 krb]
                       Phenotype  ?Phenotype  XREF GO_term // Erich, [020128 dl]
                       Index Ancestor   ?GO_term XREF Descendent // Lincoln [020709 [krb]
                             Descendent ?GO_term XREF Ancestor
                       Anatomy_term ?Anatomy_term XREF GO_term // added [031107 krb]
                       Homology_group ?Homology_group XREF GO_term // added [031120 krb]
                       Expr_pattern ?Expr_pattern XREF GO_term
         Version UNIQUE Text UNIQUE Text // Lincoln, to store version number of GO
                                         // only to be attached to three parent GO_terms [krb 031028]

Proposed Changes

Unused tags

Name

Cell

Sequence

Transcript

Pseudogene

Homology_group

Expr_pattern

Version