Tissue Specific Transgene Markers

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Marker_for Transgene Summary Reference
mitochondriaWBPaper00003790Is1[myo-3::mitochondrial signal sequence::gfp]...WBPaper00003790
AIZ interneuronsWBPaper00006034Is1[lin-11::gfp]...WBPaper00006034
Phasmid channel ciliaWBPaper00029131Ex1[osm-1::gfp; rol-6(su1006)]...WBPaper00029131
ASH neuronsWBPaper00031375Ex1[sra-6::venus]...WBPaper00031375
mitochondriaWBPaper00031376Is1[myo-3::TOM20-mRFP myo-3::AAT-GFP rol-6(su1006)]...WBPaper00031376
male specific sensory neuronsWBPaper00031505Ex1[pkd-2::gfp] transcriptional fusion....WBPaper00031505
all rectal cells and P12.paWBPaper00031556Ex1[lin-26::gfp; rol-6(d)]...WBPaper00031556
adluminal plasma membraneWBPaper00031849Is1[??::OPT-2-GFP]...WBPaper00031849
presynaptic sites in inhibitory GABAergic neurons.WBPaper00031996Ex1[unc-25::sng-1-gfp]...WBPaper00031996
VA motorneuronWBPaper00032901Is1[unc-4::gfp]...WBPaper00032901
PDA cellarEx627[exp-1::GFP; dpy-20(+)] transcriptional fusion....WBPaper00031556
Tertiary fate VPC.arIs101[K09H11.1::yfp]...WBPaper00026909
Primary fate VPC.arIs92[egl-17::cfp-lacZ]...WBPaper00026909
Posterior cortex/Cortical polarity.axEx1094[pie-1::PAR-2-GFP]. Amino-terminal GFP-tagged SPD-...WBPaper00024346
primary fate VPCayIs4[egl-17::gfp]. Integrated transgenic line of the e...WBPaper00032102
M cellayIs7[hlh-8::gfp]...WBPaper00032077
rectal cellsbxIs7[egl-5::gfp]. The egl-5::gfp reporter (EM#278) con...WBPaper00031556
musclesccIs4251[myo-3::Ngfp-lacZ; myo-3::Mtgfp]...WBPaper00031556
nuclear laminaccIs4810[lmn-1::gfp]. A fusion of GFP to the C-terminus of...WBPaper00026936
nuclear laminaccIs4811[lmn-1::lmn-1-gfp-lmn-1 3UTR; pMH86(dpy-20(+)]...WBPaper00026936
nuclear laminaccIs4812[lmn-1::lmn-1-gfp-lmn-1 3UTR; pMH86(dpy-20(+)]...WBPaper00026936
centrosomecgc6572Is1[pie-1::gfp-spd-2] translational fusion....WBPaper00024346
all neuronsedIs6[unc-119::gfp]...WBPaper00031556
CEP neuronsegIs1[dat-1::gfp]...WBPaper00031917
engulfing cellsenIs7[ced-1::ced-1-GFP; unc-76(+)]...WBPaper00031556
all neuronsevIs111[F25B3.3::GFP]...WBPaper00031556
DA and DB motor axonsevIs82b[unc-129::gfp] transcriptional reporter....WBPaper00032506
PDA cellfpIs1[ace-3/4::gfp; pha-1(+)] transcriptional fusion....WBPaper00031556
ADL neuronsgmIs12[srb-6::gfp]...WBPaper00004727
adherens junction in epithelial cellsjcIs1[ajm-1::gfp; unc-29(+); rol-6(su1006)]...WBPaper00031556
axons of VD/DD neurons.juIs73[unc-25::gfp]...WBPaper00032090
AVL neuronjuIs8[unc-25::gfp]...WBPaper00004727
Presynaptic terminals were visualized using unc-47::SNB-CFP. Postsynaptic GABA receptor fields were visualized by unc-49::UNC-49B::YFP.krIs1[unc-47::SNB-CFP; UNC-49::YFP; lin-15(+)]...WBPaper00005798
rectal cellskuIs34[sem-4::gfp] translational fusion. A translational...WBPaper00031556
rectal cellskuIs36[egl-26::gfp] transcriptional fusion....WBPaper00031556
AWB ciliakyIs104[str-1::gfp]...WBPaper00029131
SMDD neuronskyIs123[ZC21.2::gfp; lin-15(+)]...WBPaper00004727
AWC neuronskyIs140[str-2::gfp]...WBPaper00004727
OLQ ciliakyIs141[osm-9::GFP; lin-15(+)]...WBPaper00029131
HSN neuronskyIs179[unc-86::gfp, lin-15(+)]...WBPaper00031910
AWA neuronskyIs37[odr-10::gfp]. With the odr-10 promoter and the fi...WBPaper00004727
AWA ciliakyIs53[odr-10::gfp]. GFP tagged full length ODR-10....WBPaper00029131
RID neuronlqIs4[ceh-10::gfp; lin-15]...WBPaper00006180
centrosomeltIs24[pAZ132; unc-119(+); pie-1::GFP::tba-2]...WBPaper00031431
apical membrane in epithelial cellsmcEx242[che-14::gfp; rol-6(d)]...WBPaper00031556
adherens junction in epithelial cellsmcIs47[dlg-1::GFP]...WBPaper00031556
Secondary fate VPC.mfIs42[lip-1::yfp]...WBPaper00029401
AIY neuronsmgIs18[ttx-3::gfp]...WBPaper00006180
AIZ neuronsmgIs21[lin-11::gfp]...WBPaper00004727
Marker for the amphid and phasmid cilia.mnIs17[osm-6::gfp; unc-36(+)]...WBPaper00031375
cilium structure in male specific neuronsmyEx552[pkd-2::tbb-4-tdTomato]...WBPaper00031566
Secondary fate VPC.nIs106[lin-11::gfp]. containing 5.2 kb of 5'UTR and ATG ...WBPaper00026909
Synaptic vesicle.nIs52[unc-25::SNB-1-GFP]...WBPaper00031112
CEPsh cellsnsIs105[hlh-17::GFP]...WBPaper00031917
CEPsh cellsnsIs108[ptr-10::myrRFP]...WBPaper00031917
CEPsh cellsnsIs136[ptr-10::myrRFP]...WBPaper00031917
ASER neuronntIs1[gcy-5::gfp]...WBPaper00031375
RIS neuronnuIs1[glr-1::gfp]...WBPaper00006180
ASEL, ASER, AWCL, AWCR neuronsotEx2645[ceh-36::gfp::unc-54 3'UTR] transcriptional fusion...WBPaper00028430
ASEL, ASER, AWCL, AWCR neuronsotEx2646[ceh-36::gfp::unc-54 3'UTR] transcriptional fusion...WBPaper00028430
AVK neuronsotEx93[flp-1::gfp]...WBPaper00004727
RIS neuronotIs11[zig-5::gfp] promoter fusion. PCR product of the p...WBPaper00006180
ASEL and excretory glandotIs114[lim-6::gfp, rol-6(d)]...WBPaper00006052
all neuronsotIs117[unc-33::gfp; unc-4(+)]...WBPaper00004727
RID neuronotIs12[zig-5::gfp] promoter fusion. PCR product of the p...WBPaper00006180
AIY neurons marked by RFP.otIs121[ttx-3::rfp; unc-122::gfp]...WBPaper00006180
AIY neuronsotIs122[sra-11-3::gfp; unc-4(+)]...WBPaper00004727
AIY neuronsotIs123[sra-11-3::gfp; unc-4(+)]...WBPaper00004727
ASERL and ASER neuronsotIs125[flp-6::gfp]...WBPaper00006052
AIY neuronsotIs133[ttx-3promB::rfp; pNC4.2(unc-4(+)]...WBPaper00031565
AIM and ASI neuronsotIs14[zig-3::gfp] promoter fusion. PCR product of the p...WBPaper00004727
ASER neuronotIs186[gcy-5::gfp]...WBPaper00032078
ADL neuronsotIs24[sre-1::gfp; dpy-20(+)]...WBPaper00004727
ASEL neuronotIs3[gcy-7::gfp]...WBPaper00006052
RID neuronotIs33[kal-1::gfp]...WBPaper00006180
RIS neuronotIs39[unc-47(del)::gfp; lin-15(+)]. The otIs39 integran...WBPaper00006180
all neuronsotIs45[unc-119::gfp]...WBPaper00004727
ASEL and excretory glandotIs6[lim-6::gfp, rol-6(d)]...WBPaper00006052
AIY and AIA neuronsotIs62[sra-11-3::gfp; pRF4]...WBPaper00004727
ASI neuronsotIs7[zig-2::gfp] promoter fusion. PCR product of the p...WBPaper00004727
PVT neuronotIs85[srq-1::gfp; rol-6(d)]. The srq-1 reporter is a tr...WBPaper00005633
PVT neuronotIs90[pin-2::gfp; rol-6(d)]...WBPaper00005633
GABA motor neuronsoxIs12[unc-47::gfp]...WBPaper00031112
Clustering of acetylcholine receptor in muscles.oxIs22[unc-49B::gfp]...WBPaper00031112
PVQ neuronsoyIs14[sra-6::gfp]...WBPaper00005633
AFD neuronsoyIs17[gcy-8::gfp; lin-15(+)]...WBPaper00004727
AFD ciliaoyIs18[gcy-8::gfp; lin-15(+)]...WBPaper00029131
secondary fate VPCoyIs31[lin-11::gfp] transcriptional fusion....WBPaper00032102
vas deferensqqIs1[plg-1::gfp, unc-119(+)] transcriptional fusion...WBPaper00032027
intestinal cellsrrIs1[elt-2::GFP, unc-119(+)]...WBPaper00031534
HSN neuronsrtEx238[nlp-1::gfp]...WBPaper00032908
centrosomeruIs32[pie-1::GFP-his-11, unc-119(+)]...WBPaper00031431
ASI neuronssaIs7[daf-7::gfp]...WBPaper00004727
anchor cellsyIs107[lin-3({Delta}pes-10)::GFP]...WBPaper00032102
VPC progenysyIs186[pes-10::7XTCF-mCherry-let-858(3'UTR); unc-119(+)]...WBPaper00032129
VPC progenysyIs187[pes-10::7XTCF-mCherry-let-858(3'UTR); unc-119(+)]...WBPaper00032129
VPC progenysyIs188[pes-10::7XTCF-mCherry-let-858(3'UTR); unc-119(+)]...WBPaper00032129
PDA cellsyIs63[cog-1::cog-1-gfp]...WBPaper00031556
PVT neuronsyIs7[gpa-2::lacZ; dpy-20(+)]...WBPaper00005633
muscle armstrIs25[him-4::MB::YFP, F25B3.3::DsRed2, rol-6(su1006)]...WBPaper00025227
muscle armstrIs30[(him-4p::MB::YFP; hmr-1b::DsRed2; unc-129neural-s...WBPaper00025227
AIY neuronsutEx54[C36B7.7::gfp; pRF4]...WBPaper00004727
touch receptor neuronsuvEx5[mec-4::GFP]...WBPaper00027349
egg laying muscles (vulval muscle and uterine muscle).vsIs100[ELM::GFP, lin-15(+)]. ELM stands for Egg Laying M...WBPaper00031438
VC neuronsvsIs13[pes-10::gfp]. A 500 bp VC enhancer fragment from ...WBPaper00006049
HSN neuronsvsIs97[HSN::DsRed2, lin-15(+)]...WBPaper00031438
dopamine neuronsvtIs1[dat-1::gfp; rol-6] transcriptional fusion....WBPaper00005147
Seam cell.wIs1[SCM::nls-lacZ; rol-6(su1006)] Seam cell specific ...WBPaper00002772
descendants of intestinal cellswIs137[end-3::END-3(P202L)-GFP; rol-6]...WBPaper00031534
Seam cell.wIs2[SCM::nls-lacZ; rol-6(su1006)] Seam cell specific ...WBPaper00002772
Seam cell nuclei.wIs51[SCM::gfp, unc-119(+)]. SCM stands for seam cell s...WBPaper00030774
NSM neuronszdIs13[tph-1::gfp] transcriptional fusion....WBPaper00031671
touch receptor neuronszdIs5[mec-4::GFP]...WBPaper00032072
secondary fate VPCzhIs4...WBPaper00032102
cytokinetic signalingzuIs45[nmy-2::gfp]...WBPaper00031431
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